Literature DB >> 33627519

Aging and rejuvenation - a modular epigenome model.

Priscila Chiavellini1, Martina Canatelli-Mallat1, Marianne Lehmann1, Maria D Gallardo1, Claudia B Herenu2, Jose L Cordeiro3, James Clement4, Rodolfo G Goya1.   

Abstract

The view of aging has evolved in parallel with the advances in biomedical sciences. Long considered as an irreversible process where interventions were only aimed at slowing down its progression, breakthrough discoveries like animal cloning and cell reprogramming have deeply changed our understanding of postnatal development, giving rise to the emerging view that the epigenome is the driver of aging. The idea was significantly strengthened by the converging discovery that DNA methylation (DNAm) at specific CpG sites could be used as a highly accurate biomarker of age defined by an algorithm known as the Horvath clock. It was at this point where epigenetic rejuvenation came into play as a strategy to reveal to what extent biological age can be set back by making the clock tick backwards. Initial evidence suggests that when the clock is forced to tick backwards in vivo, it is only able to drag the phenotype to a partially rejuvenated condition. In order to explain the results, a bimodular epigenome is proposed, where module A represents the DNAm clock component and module B the remainder of the epigenome. Epigenetic rejuvenation seems to hold the key to arresting or even reversing organismal aging.

Entities:  

Keywords:  DNA methylation; aging; cell reprogramming; epigenetic clock; rejuvenation

Mesh:

Substances:

Year:  2021        PMID: 33627519      PMCID: PMC7950254          DOI: 10.18632/aging.202712

Source DB:  PubMed          Journal:  Aging (Albany NY)        ISSN: 1945-4589            Impact factor:   5.682


  60 in total

1.  Reprogramming in vivo produces teratomas and iPS cells with totipotency features.

Authors:  María Abad; Lluc Mosteiro; Cristina Pantoja; Marta Cañamero; Teresa Rayon; Inmaculada Ors; Osvaldo Graña; Diego Megías; Orlando Domínguez; Dolores Martínez; Miguel Manzanares; Sagrario Ortega; Manuel Serrano
Journal:  Nature       Date:  2013-09-11       Impact factor: 49.962

2.  NANOG Reverses the Myogenic Differentiation Potential of Senescent Stem Cells by Restoring ACTIN Filamentous Organization and SRF-Dependent Gene Expression.

Authors:  Panagiotis Mistriotis; Vivek K Bajpai; Xiaoyan Wang; Na Rong; Aref Shahini; Mohammadnabi Asmani; Mao-Shih Liang; Jianmin Wang; Pedro Lei; Song Liu; Ruogang Zhao; Stelios T Andreadis
Journal:  Stem Cells       Date:  2016-07-11       Impact factor: 6.277

3.  In Vivo Amelioration of Age-Associated Hallmarks by Partial Reprogramming.

Authors:  Alejandro Ocampo; Pradeep Reddy; Paloma Martinez-Redondo; Aida Platero-Luengo; Fumiyuki Hatanaka; Tomoaki Hishida; Mo Li; David Lam; Masakazu Kurita; Ergin Beyret; Toshikazu Araoka; Eric Vazquez-Ferrer; David Donoso; Jose Luis Roman; Jinna Xu; Concepcion Rodriguez Esteban; Gabriel Nuñez; Estrella Nuñez Delicado; Josep M Campistol; Isabel Guillen; Pedro Guillen; Juan Carlos Izpisua Belmonte
Journal:  Cell       Date:  2016-12-15       Impact factor: 41.582

Review 4.  DNA methylation-based biomarkers and the epigenetic clock theory of ageing.

Authors:  Steve Horvath; Kenneth Raj
Journal:  Nat Rev Genet       Date:  2018-06       Impact factor: 53.242

5.  Accelerated hippocampal biological aging in bipolar disorder.

Authors:  Gabriel R Fries; Isabelle E Bauer; Giselli Scaini; Samira S Valvassori; Consuelo Walss-Bass; Jair C Soares; Joao Quevedo
Journal:  Bipolar Disord       Date:  2019-12-05       Impact factor: 6.744

6.  Genome-wide methylation profiles reveal quantitative views of human aging rates.

Authors:  Gregory Hannum; Justin Guinney; Ling Zhao; Li Zhang; Guy Hughes; SriniVas Sadda; Brandy Klotzle; Marina Bibikova; Jian-Bing Fan; Yuan Gao; Rob Deconde; Menzies Chen; Indika Rajapakse; Stephen Friend; Trey Ideker; Kang Zhang
Journal:  Mol Cell       Date:  2012-11-21       Impact factor: 17.970

7.  HIV-1 Infection Accelerates Age According to the Epigenetic Clock.

Authors:  Steve Horvath; Andrew J Levine
Journal:  J Infect Dis       Date:  2015-05-12       Impact factor: 5.226

Review 8.  Rejuvenation by cell reprogramming: a new horizon in gerontology.

Authors:  Rodolfo G Goya; Marianne Lehmann; Priscila Chiavellini; Martina Canatelli-Mallat; Claudia B Hereñú; Oscar A Brown
Journal:  Stem Cell Res Ther       Date:  2018-12-17       Impact factor: 6.832

9.  Development of Tissue-Specific Age Predictors Using DNA Methylation Data.

Authors:  Heeyeon Choi; Soobok Joe; Hojung Nam
Journal:  Genes (Basel)       Date:  2019-11-04       Impact factor: 4.096

10.  Aging of blood can be tracked by DNA methylation changes at just three CpG sites.

Authors:  Carola Ingrid Weidner; Qiong Lin; Carmen Maike Koch; Lewin Eisele; Fabian Beier; Patrick Ziegler; Dirk Olaf Bauerschlag; Karl-Heinz Jöckel; Raimund Erbel; Thomas Walter Mühleisen; Martin Zenke; Tim Henrik Brümmendorf; Wolfgang Wagner
Journal:  Genome Biol       Date:  2014-02-03       Impact factor: 13.583

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  4 in total

Review 1.  Making sense of the ageing methylome.

Authors:  Kirsten Seale; Steve Horvath; Andrew Teschendorff; Nir Eynon; Sarah Voisin
Journal:  Nat Rev Genet       Date:  2022-05-02       Impact factor: 59.581

2.  Intranasal administration of mitochondria improves spatial memory in olfactory bulbectomized mice.

Authors:  Natalia V Bobkova; Daria Y Zhdanova; Natalia V Belosludtseva; Nikita V Penkov; Galina D Mironova
Journal:  Exp Biol Med (Maywood)       Date:  2021-11-02

Review 3.  P4 Medicine as a model for precision periodontal care.

Authors:  P Mark Bartold; Sašo Ivanovski
Journal:  Clin Oral Investig       Date:  2022-03-28       Impact factor: 3.606

4.  A risk signature of four aging-related genes has clinical prognostic value and is associated with a tumor immune microenvironment in glioma.

Authors:  Haitao Luo; Chuming Tao; Xiaoyan Long; Kai Huang; Xingen Zhu
Journal:  Aging (Albany NY)       Date:  2021-06-10       Impact factor: 5.682

  4 in total

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