Literature DB >> 27060773

Extreme promiscuity of a bacterial and a plant diterpene synthase enables combinatorial biosynthesis.

Meirong Jia1, Kevin C Potter1, Reuben J Peters2.   

Abstract

Diterpenes are widely distributed across many biological kingdoms, where they serve a diverse range of physiological functions, and some have significant industrial utility. Their biosynthesis involves class I diterpene synthases (DTSs), whose activity can be preceded by that of class II diterpene cyclases (DTCs). Here, a modular metabolic engineering system was used to examine the promiscuity of DTSs. Strikingly, both a bacterial and plant DTS were found to exhibit extreme promiscuity, reacting with all available precursors with orthogonal activity, producing an olefin or hydroxyl group, respectively. Such DTS promiscuity enables combinatorial biosynthesis, with remarkably high yields for these unoptimized non-native enzymatic combinations (up to 15mg/L). Indeed, it was possible to readily characterize the 13 unknown products. Notably, 16 of the observed diterpenes were previously inaccessible, and these results provide biosynthetic routes that are further expected to enable assembly of more extended pathways to produce additionally elaborated 'non-natural' diterpenoids.
Copyright © 2016 International Metabolic Engineering Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Diterpene synthases; Diterpenes; Metabolic engineering; Sclareol; Substrate specificity; ent-kolavelool; ent-manool; ent-manoyl oxide; ent-sclareol; iso-abienol; kolavelool; nosyberkol; viteagnusin D; vitexifolin A

Mesh:

Substances:

Year:  2016        PMID: 27060773      PMCID: PMC4907819          DOI: 10.1016/j.ymben.2016.04.001

Source DB:  PubMed          Journal:  Metab Eng        ISSN: 1096-7176            Impact factor:   9.783


  54 in total

Review 1.  Two rings in them all: the labdane-related diterpenoids.

Authors:  Reuben J Peters
Journal:  Nat Prod Rep       Date:  2010-10-01       Impact factor: 13.423

2.  A novel labda-7,13e-dien-15-ol-producing bifunctional diterpene synthase from Selaginella moellendorffii.

Authors:  Sibongile Mafu; Matthew L Hillwig; Reuben J Peters
Journal:  Chembiochem       Date:  2011-07-12       Impact factor: 3.164

3.  Molecular evolution of the substrate specificity of ent-kaurene synthases to adapt to gibberellin biosynthesis in land plants.

Authors:  Manami Shimane; Yohei Ueno; Keiko Morisaki; Shingo Oogami; Masahiro Natsume; Ken-Ichiro Hayashi; Hiroshi Nozaki; Hiroshi Kawaide
Journal:  Biochem J       Date:  2014-09-15       Impact factor: 3.857

4.  Characterization of the Rv3378c gene product, a new diterpene synthase for producing tuberculosinol and (13R, S)-isotuberculosinol (nosyberkol), from the Mycobacterium tuberculosis H37Rv genome.

Authors:  Chiaki Nakano; Takahiro Ootsuka; Kazutoshi Takayama; Toshiaki Mitsui; Tsutomu Sato; Tsutomu Hoshino
Journal:  Biosci Biotechnol Biochem       Date:  2011-01-07       Impact factor: 2.043

5.  Bifunctional cis-abienol synthase from Abies balsamea discovered by transcriptome sequencing and its implications for diterpenoid fragrance production.

Authors:  Philipp Zerbe; Angela Chiang; Macaire Yuen; Björn Hamberger; Britta Hamberger; Jason A Draper; Robert Britton; Jörg Bohlmann
Journal:  J Biol Chem       Date:  2012-02-15       Impact factor: 5.157

6.  Evident and latent plasticity across the rice diterpene synthase family with potential implications for the evolution of diterpenoid metabolism in the cereals.

Authors:  Dana Morrone; Matthew L Hillwig; Matthew E Mead; Luke Lowry; D Bruce Fulton; Reuben J Peters
Journal:  Biochem J       Date:  2011-05-01       Impact factor: 3.857

Review 7.  The role of momilactones in rice allelopathy.

Authors:  Hisashi Kato-Noguchi; Reuben J Peters
Journal:  J Chem Ecol       Date:  2013-02-06       Impact factor: 2.626

8.  Biochemical characterization of the castor bean ent-kaurene synthase(-like) family supports quantum chemical view of diterpene cyclization.

Authors:  Alana J Jackson; David M Hershey; Taylor Chesnut; Meimei Xu; Reuben J Peters
Journal:  Phytochemistry       Date:  2014-05-05       Impact factor: 4.072

9.  Functional identification of rice syn-copalyl diphosphate synthase and its role in initiating biosynthesis of diterpenoid phytoalexin/allelopathic natural products.

Authors:  Meimei Xu; Matthew L Hillwig; Sladjana Prisic; Robert M Coates; Reuben J Peters
Journal:  Plant J       Date:  2004-08       Impact factor: 6.417

10.  Functional characterization of wheat ent-kaurene(-like) synthases indicates continuing evolution of labdane-related diterpenoid metabolism in the cereals.

Authors:  Ke Zhou; Meimei Xu; Mollie Tiernan; Qian Xie; Tomonobu Toyomasu; Chizu Sugawara; Madoka Oku; Masami Usui; Wataru Mitsuhashi; Makiko Chono; Peter M Chandler; Reuben J Peters
Journal:  Phytochemistry       Date:  2012-09-22       Impact factor: 4.072

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  23 in total

1.  Combinatorial biosynthesis and the basis for substrate promiscuity in class I diterpene synthases.

Authors:  Meirong Jia; Sambit K Mishra; Samuel Tufts; Robert L Jernigan; Reuben J Peters
Journal:  Metab Eng       Date:  2019-06-17       Impact factor: 9.783

Review 2.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

3.  cis or trans with class II diterpene cyclases.

Authors:  Meirong Jia; Reuben J Peters
Journal:  Org Biomol Chem       Date:  2017-04-11       Impact factor: 3.876

4.  Catalytic Bases and Stereocontrol in Lamiaceae Class II Diterpene Cyclases.

Authors:  Samuel Schulte; Kevin C Potter; Cody Lemke; Reuben J Peters
Journal:  Biochemistry       Date:  2018-05-31       Impact factor: 3.162

5.  Functional Diversification of Kaurene Synthase-Like Genes in Isodon rubescens.

Authors:  Baolong Jin; Guanghong Cui; Juan Guo; Jinfu Tang; Lixin Duan; Huixin Lin; Ye Shen; Tong Chen; Huabei Zhang; Luqi Huang
Journal:  Plant Physiol       Date:  2017-04-05       Impact factor: 8.340

6.  Correction: cis or trans with class II diterpene cyclases.

Authors:  Meirong Jia; Reuben J Peters
Journal:  Org Biomol Chem       Date:  2019-08-21       Impact factor: 3.876

7.  Magnesium-specific ring expansion/contraction catalysed by the class II diterpene cyclase from pleuromutilin biosynthesis.

Authors:  Cody Lemke; Owen Whitham; Reuben J Peters
Journal:  Org Biomol Chem       Date:  2020-07-29       Impact factor: 3.876

8.  Functional Diversity of Diterpene Synthases in the Biofuel Crop Switchgrass.

Authors:  Kyle A Pelot; Ruibing Chen; David M Hagelthorn; Cari A Young; J Bennett Addison; Andrew Muchlinski; Dorothea Tholl; Philipp Zerbe
Journal:  Plant Physiol       Date:  2018-07-15       Impact factor: 8.340

9.  Changing Face: A Key Residue for the Addition of Water by Sclareol Synthase.

Authors:  Meirong Jia; Terrence E O'Brien; Yue Zhang; Justin B Siegel; Dean J Tantillo; Reuben J Peters
Journal:  ACS Catal       Date:  2018-03-08       Impact factor: 13.084

10.  Abietane-Type Diterpenoids Inhibit Protein Tyrosine Phosphatases by Stabilizing an Inactive Enzyme Conformation.

Authors:  Michael K Hjortness; Laura Riccardi; Akarawin Hongdusit; Sophia Ruppe; Mengxia Zhao; Edward Y Kim; Peter H Zwart; Banumathi Sankaran; Haribabu Arthanari; Marcelo C Sousa; Marco De Vivo; Jerome M Fox
Journal:  Biochemistry       Date:  2018-09-14       Impact factor: 3.162

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