Literature DB >> 28841019

Structural and Chemical Biology of Terpenoid Cyclases.

David W Christianson1.   

Abstract

The year 2017 marks the twentieth anniversary of terpenoid cyclase structural biology: a trio of terpenoid cyclase structures reported together in 1997 were the first to set the foundation for understanding the enzymes largely responsible for the exquisite chemodiversity of more than 80000 terpenoid natural products. Terpenoid cyclases catalyze the most complex chemical reactions in biology, in that more than half of the substrate carbon atoms undergo changes in bonding and hybridization during a single enzyme-catalyzed cyclization reaction. The past two decades have witnessed structural, functional, and computational studies illuminating the modes of substrate activation that initiate the cyclization cascade, the management and manipulation of high-energy carbocation intermediates that propagate the cyclization cascade, and the chemical strategies that terminate the cyclization cascade. The role of the terpenoid cyclase as a template for catalysis is paramount to its function, and protein engineering can be used to reprogram the cyclization cascade to generate alternative and commercially important products. Here, I review key advances in terpenoid cyclase structural and chemical biology, focusing mainly on terpenoid cyclases and related prenyltransferases for which X-ray crystal structures have informed and advanced our understanding of enzyme structure and function.

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Year:  2017        PMID: 28841019      PMCID: PMC5599884          DOI: 10.1021/acs.chemrev.7b00287

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  461 in total

1.  Structure and reaction geometry of geranylgeranyl diphosphate synthase from Sinapis alba.

Authors:  Daniel P Kloer; Ralf Welsch; Peter Beyer; Georg E Schulz
Journal:  Biochemistry       Date:  2006-12-01       Impact factor: 3.162

2.  Abietadiene synthase catalysis: mutational analysis of a prenyl diphosphate ionization-initiated cyclization and rearrangement.

Authors:  Reuben J Peters; Rodney B Croteau
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

3.  Rational engineering of plasticity residues of sesquiterpene synthases from Artemisia annua: product specificity and catalytic efficiency.

Authors:  Jian-Xu Li; Xin Fang; Qin Zhao; Ju-Xin Ruan; Chang-Qing Yang; Ling-Jian Wang; David J Miller; Juan A Faraldos; Rudolf K Allemann; Xiao-Ya Chen; Peng Zhang
Journal:  Biochem J       Date:  2013-05-01       Impact factor: 3.857

Review 4.  Squalene hopene cyclases: highly promiscuous and evolvable catalysts for stereoselective CC and CX bond formation.

Authors:  Stephan C Hammer; Per-Olof Syrén; Miriam Seitz; Bettina M Nestl; Bernhard Hauer
Journal:  Curr Opin Chem Biol       Date:  2013-02-26       Impact factor: 8.822

5.  Bifunctional triterpene/sesquarterpene cyclase: tetraprenyl-β-curcumene cyclase is also squalene cyclase in Bacillus megaterium.

Authors:  Tsutomu Sato; Hiroko Hoshino; Satoru Yoshida; Mami Nakajima; Tsutomu Hoshino
Journal:  J Am Chem Soc       Date:  2011-10-13       Impact factor: 15.419

6.  Prenylation of olivetolate by a hemp transferase yields cannabigerolic acid, the precursor of tetrahydrocannabinol.

Authors:  M Fellermeier; M H Zenk
Journal:  FEBS Lett       Date:  1998-05-08       Impact factor: 4.124

7.  Enhancing isoprene production by genetic modification of the 1-deoxy-d-xylulose-5-phosphate pathway in Bacillus subtilis.

Authors:  Junfeng Xue; Birgitte K Ahring
Journal:  Appl Environ Microbiol       Date:  2011-02-04       Impact factor: 4.792

8.  Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism.

Authors:  Pia Lindberg; Sungsoon Park; Anastasios Melis
Journal:  Metab Eng       Date:  2009-10-13       Impact factor: 9.783

9.  Crystal structure of type-III geranylgeranyl pyrophosphate synthase from Saccharomyces cerevisiae and the mechanism of product chain length determination.

Authors:  Tao-Hsin Chang; Rey-Ting Guo; Tzu-Ping Ko; Andrew H-J Wang; Po-Huang Liang
Journal:  J Biol Chem       Date:  2006-03-22       Impact factor: 5.157

10.  Quantitative exploration of the catalytic landscape separating divergent plant sesquiterpene synthases.

Authors:  Paul E O'Maille; Arthur Malone; Nikki Dellas; B Andes Hess; Lidia Smentek; Iseult Sheehan; Bryan T Greenhagen; Joe Chappell; Gerard Manning; Joseph P Noel
Journal:  Nat Chem Biol       Date:  2008-09-07       Impact factor: 15.040

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  157 in total

1.  Probing Enzymatic Structure and Function in the Dihydroxylating Sesquiterpene Synthase ZmEDS.

Authors:  Jin Liang; Liping Wang; Jiang Liu; Qinqin Shen; Jingye Fu; Reuben J Peters; Qiang Wang
Journal:  Biochemistry       Date:  2020-06-28       Impact factor: 3.162

2.  Atolypenes, Tricyclic Bacterial Sesterterpenes Discovered Using a Multiplexed In Vitro Cas9-TAR Gene Cluster Refactoring Approach.

Authors:  Seong-Hwan Kim; Wanli Lu; Mahmoud Kamal Ahmadi; Daniel Montiel; Melinda A Ternei; Sean F Brady
Journal:  ACS Synth Biol       Date:  2018-12-21       Impact factor: 5.110

Review 3.  Streptomycetes: Surrogate hosts for the genetic manipulation of biosynthetic gene clusters and production of natural products.

Authors:  Keshav K Nepal; Guojun Wang
Journal:  Biotechnol Adv       Date:  2018-10-09       Impact factor: 14.227

Review 4.  Enzymatic Cascade Reactions in Biosynthesis.

Authors:  Christopher T Walsh; Bradley S Moore
Journal:  Angew Chem Int Ed Engl       Date:  2019-02-20       Impact factor: 15.336

5.  Structural studies of geranylgeranylglyceryl phosphate synthase, a prenyltransferase found in thermophilic Euryarchaeota.

Authors:  P N Blank; A A Barnett; T A Ronnebaum; K E Alderfer; B N Gillott; D W Christianson; J A Himmelberger
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-05-29       Impact factor: 7.652

6.  Crystal structure of F95Q epi-isozizaene synthase, an engineered sesquiterpene cyclase that generates biofuel precursors β- and γ-curcumene.

Authors:  Patrick N Blank; Golda H Barrow; David W Christianson
Journal:  J Struct Biol       Date:  2019-05-29       Impact factor: 2.867

7.  Experiment and Simulation Reveal How Mutations in Functional Plasticity Regions Guide Plant Monoterpene Synthase Product Outcome.

Authors:  Nicole G H Leferink; Kara E Ranaghan; Vijaykumar Karuppiah; Andrew Currin; Marc W van der Kamp; Adrian J Mulholland; Nigel S Scrutton
Journal:  ACS Catal       Date:  2018-03-24       Impact factor: 13.084

8.  Structure of Sesquisabinene Synthase 1, a Terpenoid Cyclase That Generates a Strained [3.1.0] Bridged-Bicyclic Product.

Authors:  Patrick N Blank; Stephen A Shinsky; David W Christianson
Journal:  ACS Chem Biol       Date:  2019-04-17       Impact factor: 5.100

Review 9.  Synthetic biology, combinatorial biosynthesis, and chemo‑enzymatic synthesis of isoprenoids.

Authors:  Alexandra A Malico; Miles A Calzini; Anuran K Gayen; Gavin J Williams
Journal:  J Ind Microbiol Biotechnol       Date:  2020-09-03       Impact factor: 3.346

10.  Predicting Productive Binding Modes for Substrates and Carbocation Intermediates in Terpene Synthases-Bornyl Diphosphate Synthase as a Representative Case.

Authors:  Terrence E O'Brien; Steven J Bertolani; Yue Zhang; Justin B Siegel; Dean J Tantillo
Journal:  ACS Catal       Date:  2018-03-08       Impact factor: 13.084

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