Literature DB >> 30169954

Abietane-Type Diterpenoids Inhibit Protein Tyrosine Phosphatases by Stabilizing an Inactive Enzyme Conformation.

Michael K Hjortness1, Laura Riccardi2, Akarawin Hongdusit1, Sophia Ruppe1, Mengxia Zhao3, Edward Y Kim1, Peter H Zwart4, Banumathi Sankaran4, Haribabu Arthanari5, Marcelo C Sousa6, Marco De Vivo2, Jerome M Fox1.   

Abstract

Protein tyrosine phosphatases (PTPs) contribute to a striking variety of human diseases, yet they remain vexingly difficult to inhibit with uncharged, cell-permeable molecules; no inhibitors of PTPs have been approved for clinical use. This study uses a broad set of biophysical analyses to evaluate the use of abietane-type diterpenoids, a biologically active class of phytometabolites with largely nonpolar structures, for the development of pharmaceutically relevant PTP inhibitors. Results of nuclear magnetic resonance analyses, mutational studies, and molecular dynamics simulations indicate that abietic acid can inhibit protein tyrosine phosphatase 1B, a negative regulator of insulin signaling and an elusive drug target, by binding to its active site in a non-substrate-like manner that stabilizes the catalytically essential WPD loop in an inactive conformation; detailed kinetic studies, in turn, show that minor changes in the structures of abietane-type diterpenoids (e.g., the addition of hydrogens) can improve potency (i.e., lower IC50) by 7-fold. These findings elucidate a previously uncharacterized mechanism of diterpenoid-mediated inhibition and suggest, more broadly, that abietane-type diterpenoids are a promising source of structurally diverse-and, intriguingly, microbially synthesizable-molecules on which to base the design of new PTP-inhibiting therapeutics.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 30169954      PMCID: PMC6219988          DOI: 10.1021/acs.biochem.8b00655

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  57 in total

1.  Phosphorylation of the AMPA receptor GluR1 subunit is required for synaptic plasticity and retention of spatial memory.

Authors:  Hey-Kyoung Lee; Kogo Takamiya; Jung-Soo Han; Hengye Man; Chong-Hyun Kim; Gavin Rumbaugh; Sandy Yu; Lin Ding; Chun He; Ronald S Petralia; Robert J Wenthold; Michela Gallagher; Richard L Huganir
Journal:  Cell       Date:  2003-03-07       Impact factor: 41.582

2.  Development and testing of a general amber force field.

Authors:  Junmei Wang; Romain M Wolf; James W Caldwell; Peter A Kollman; David A Case
Journal:  J Comput Chem       Date:  2004-07-15       Impact factor: 3.376

Review 3.  Two rings in them all: the labdane-related diterpenoids.

Authors:  Reuben J Peters
Journal:  Nat Prod Rep       Date:  2010-10-01       Impact factor: 13.423

Review 4.  Use of protein tyrosine phosphatase inhibitors as promising targeted therapeutic drugs.

Authors:  P Heneberg
Journal:  Curr Med Chem       Date:  2009       Impact factor: 4.530

Review 5.  Using chemical shift perturbation to characterise ligand binding.

Authors:  Mike P Williamson
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-03-21       Impact factor: 9.795

6.  Protein tyrosine phosphatase activity of an essential virulence determinant in Yersinia.

Authors:  K L Guan; J E Dixon
Journal:  Science       Date:  1990-08-03       Impact factor: 47.728

Review 7.  FDA-approved small-molecule kinase inhibitors.

Authors:  Peng Wu; Thomas E Nielsen; Mads H Clausen
Journal:  Trends Pharmacol Sci       Date:  2015-05-12       Impact factor: 14.819

Review 8.  New developments in the chemistry and biology of the bioactive constituents of Tanshen.

Authors:  Xihong Wang; Susan L Morris-Natschke; Kuo-Hsiung Lee
Journal:  Med Res Rev       Date:  2007-01       Impact factor: 12.944

Review 9.  Abietane acids: sources, biological activities, and therapeutic uses.

Authors:  A San Feliciano; M Gordaliza; M A Salinero; J M Miguel del Corral
Journal:  Planta Med       Date:  1993-12       Impact factor: 3.352

10.  H++ 3.0: automating pK prediction and the preparation of biomolecular structures for atomistic molecular modeling and simulations.

Authors:  Ramu Anandakrishnan; Boris Aguilar; Alexey V Onufriev
Journal:  Nucleic Acids Res       Date:  2012-05-08       Impact factor: 16.971

View more
  3 in total

1.  Analysis of Three Architectures for Controlling PTP1B with Light.

Authors:  Akarawin Hongdusit; Evan T Liechty; Jerome M Fox
Journal:  ACS Synth Biol       Date:  2021-12-13       Impact factor: 5.110

2.  Minimally disruptive optical control of protein tyrosine phosphatase 1B.

Authors:  Akarawin Hongdusit; Peter H Zwart; Banumathi Sankaran; Jerome M Fox
Journal:  Nat Commun       Date:  2020-02-07       Impact factor: 14.919

Review 3.  Microbial Conversion of Toxic Resin Acids.

Authors:  Natalia A Luchnikova; Kseniya M Ivanova; Ekaterina V Tarasova; Victoria V Grishko; Irina B Ivshina
Journal:  Molecules       Date:  2019-11-14       Impact factor: 4.411

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.