Literature DB >> 27026244

Automated assessment of thigh composition using machine learning for Dixon magnetic resonance images.

Yu Xin Yang1, Mei Sian Chong2,3, Laura Tay2,3, Suzanne Yew2, Audrey Yeo2, Cher Heng Tan4.   

Abstract

OBJECTIVES: To develop and validate a machine learning based automated segmentation method that jointly analyzes the four contrasts provided by Dixon MRI technique for improved thigh composition segmentation accuracy.
MATERIALS AND METHODS: The automatic detection of body composition is formulized as a three-class classification issue. Each image voxel in the training dataset is assigned with a correct label. A voxel classifier is trained and subsequently used to predict unseen data. Morphological operations are finally applied to generate volumetric segmented images for different structures. We applied this algorithm on datasets of (1) four contrast images, (2) water and fat images, and (3) unsuppressed images acquired from 190 subjects.
RESULTS: The proposed method using four contrasts achieved most accurate and robust segmentation compared to the use of combined fat and water images and the use of unsuppressed image, average Dice coefficients of 0.94 ± 0.03, 0.96 ± 0.03, 0.80 ± 0.03, and 0.97 ± 0.01 has been achieved to bone region, subcutaneous adipose tissue (SAT), inter-muscular adipose tissue (IMAT), and muscle respectively.
CONCLUSION: Our proposed method based on machine learning produces accurate tissue quantification and showed an effective use of large information provided by the four contrast images from Dixon MRI.

Entities:  

Keywords:  Body composition; Dixon sequence; Image segmentation; MRI; Machine learning

Mesh:

Year:  2016        PMID: 27026244     DOI: 10.1007/s10334-016-0547-2

Source DB:  PubMed          Journal:  MAGMA        ISSN: 0968-5243            Impact factor:   2.310


  23 in total

1.  Voxel effects within digital images of trabecular bone and their consequences on chord-length distribution measurements.

Authors:  D A Rajon; D W Jokisch; P W Patton; A P Shah; C J Watchman; W E Bolch
Journal:  Phys Med Biol       Date:  2002-05-21       Impact factor: 3.609

2.  Automated assessment of whole-body adipose tissue depots from continuously moving bed MRI: a feasibility study.

Authors:  Joel Kullberg; Lars Johansson; Håkan Ahlström; Frederic Courivaud; Peter Koken; Holger Eggers; Peter Börnert
Journal:  J Magn Reson Imaging       Date:  2009-07       Impact factor: 4.813

Review 3.  Dixon techniques for water and fat imaging.

Authors:  Jingfei Ma
Journal:  J Magn Reson Imaging       Date:  2008-09       Impact factor: 4.813

4.  Automatic quantification of subcutaneous and visceral adipose tissue from whole-body magnetic resonance images suitable for large cohort studies.

Authors:  Diana Wald; Birgit Teucher; Julien Dinkel; Rudolf Kaaks; Stefan Delorme; Heiner Boeing; Katharina Seidensaal; Hans-Peter Meinzer; Tobias Heimann
Journal:  J Magn Reson Imaging       Date:  2012-08-21       Impact factor: 4.813

5.  Automatic and quantitative assessment of regional muscle volume by multi-atlas segmentation using whole-body water-fat MRI.

Authors:  Anette Karlsson; Johannes Rosander; Thobias Romu; Joakim Tallberg; Anders Grönqvist; Magnus Borga; Olof Dahlqvist Leinhard
Journal:  J Magn Reson Imaging       Date:  2014-08-11       Impact factor: 4.813

6.  N4ITK: improved N3 bias correction.

Authors:  Nicholas J Tustison; Brian B Avants; Philip A Cook; Yuanjie Zheng; Alexander Egan; Paul A Yushkevich; James C Gee
Journal:  IEEE Trans Med Imaging       Date:  2010-04-08       Impact factor: 10.048

7.  Cardiorespiratory fitness, body composition, and all-cause and cardiovascular disease mortality in men.

Authors:  C D Lee; S N Blair; A S Jackson
Journal:  Am J Clin Nutr       Date:  1999-03       Impact factor: 7.045

8.  Automated unsupervised multi-parametric classification of adipose tissue depots in skeletal muscle.

Authors:  Alexander Valentinitsch; Dimitrios C Karampinos; Hamza Alizai; Karupppasamy Subburaj; Deepak Kumar; Thomas M Link; Sharmila Majumdar
Journal:  J Magn Reson Imaging       Date:  2012-10-23       Impact factor: 4.813

9.  Accurate quantification of visceral adipose tissue (VAT) using water-saturation MRI and computer segmentation: preliminary results.

Authors:  Diane Armao; Jean-Philippe Guyon; Zeynep Firat; Mark A Brown; Richard C Semelka
Journal:  J Magn Reson Imaging       Date:  2006-05       Impact factor: 4.813

Review 10.  Intermuscular fat: a review of the consequences and causes.

Authors:  Odessa Addison; Robin L Marcus; Paul C Lastayo; Alice S Ryan
Journal:  Int J Endocrinol       Date:  2014-01-08       Impact factor: 3.257

View more
  15 in total

1.  Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.

Authors:  Leon Lenchik; Laura Heacock; Ashley A Weaver; Robert D Boutin; Tessa S Cook; Jason Itri; Christopher G Filippi; Rao P Gullapalli; James Lee; Marianna Zagurovskaya; Tara Retson; Kendra Godwin; Joey Nicholson; Ponnada A Narayana
Journal:  Acad Radiol       Date:  2019-08-10       Impact factor: 3.173

Review 2.  MRI adipose tissue and muscle composition analysis-a review of automation techniques.

Authors:  Magnus Borga
Journal:  Br J Radiol       Date:  2018-07-24       Impact factor: 3.039

3.  Fully automatic segmentation of paraspinal muscles from 3D torso CT images via multi-scale iterative random forest classifications.

Authors:  Naoki Kamiya; Jing Li; Masanori Kume; Hiroshi Fujita; Dinggang Shen; Guoyan Zheng
Journal:  Int J Comput Assist Radiol Surg       Date:  2018-09-01       Impact factor: 2.924

4.  Association Among Age-Related Tongue Muscle Abnormality, Tongue Pressure, and Presbyphagia: A 3D MRI Study.

Authors:  Yuta Nakao; Taiji Yamashita; Kosuke Honda; Takayuki Katsuura; Yasuhiko Hama; Yuki Nakamura; Kumiko Ando; Reiichi Ishikura; Norihiko Kodama; Yuki Uchiyama; Kazuhisa Domen
Journal:  Dysphagia       Date:  2020-08-02       Impact factor: 3.438

5.  Deep learning for automated segmentation of pelvic muscles, fat, and bone from CT studies for body composition assessment.

Authors:  Robert Hemke; Colleen G Buckless; Andrew Tsao; Benjamin Wang; Martin Torriani
Journal:  Skeletal Radiol       Date:  2019-08-08       Impact factor: 2.199

6.  Age-related composition changes in swallowing-related muscles: a Dixon MRI study.

Authors:  Yuta Nakao; Yuki Uchiyama; Kosuke Honda; Taiji Yamashita; Shota Saito; Kazuhisa Domen
Journal:  Aging Clin Exp Res       Date:  2021-04-26       Impact factor: 3.636

7.  Trunk Muscle Characteristics: Differences Between Sedentary Adults With and Without Unilateral Lower Limb Amputation.

Authors:  Jaclyn M Sions; Emma H Beisheim; Mark A Hoggarth; James M Elliott; Gregory E Hicks; Ryan T Pohlig; Mayank Seth
Journal:  Arch Phys Med Rehabil       Date:  2021-03-05       Impact factor: 4.060

8.  Validation of an active shape model-based semi-automated segmentation algorithm for the analysis of thigh muscle and adipose tissue cross-sectional areas.

Authors:  Jana Kemnitz; Felix Eckstein; Adam G Culvenor; Anja Ruhdorfer; Torben Dannhauer; Susanne Ring-Dimitriou; Alexandra M Sänger; Wolfgang Wirth
Journal:  MAGMA       Date:  2017-04-28       Impact factor: 2.310

9.  Thigh muscle segmentation of chemical shift encoding-based water-fat magnetic resonance images: The reference database MyoSegmenTUM.

Authors:  Sarah Schlaeger; Friedemann Freitag; Elisabeth Klupp; Michael Dieckmeyer; Dominik Weidlich; Stephanie Inhuber; Marcus Deschauer; Benedikt Schoser; Sarah Bublitz; Federica Montagnese; Claus Zimmer; Ernst J Rummeny; Dimitrios C Karampinos; Jan S Kirschke; Thomas Baum
Journal:  PLoS One       Date:  2018-06-07       Impact factor: 3.240

Review 10.  Advanced body composition assessment: from body mass index to body composition profiling.

Authors:  Magnus Borga; Janne West; Jimmy D Bell; Nicholas C Harvey; Thobias Romu; Steven B Heymsfield; Olof Dahlqvist Leinhard
Journal:  J Investig Med       Date:  2018-03-25       Impact factor: 2.895

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.