Literature DB >> 26994377

Technology development for natural product biosynthesis in Saccharomyces cerevisiae.

John M Billingsley1, Anthony B DeNicola1, Yi Tang2.   

Abstract

The explosion of genomic sequence data and the significant advancements in synthetic biology have led to the development of new technologies for natural products discovery and production. Using powerful genetic tools, the yeast Saccharomyces cerevisiae has been engineered as a production host for natural product pathways from bacterial, fungal, and plant species. With an expanding library of characterized genetic parts, biosynthetic pathways can be refactored for optimized expression in yeast. New engineering strategies have enabled the increased production of valuable secondary metabolites by tuning metabolic pathways. Improvements in high-throughput screening methods have facilitated the rapid identification of variants with improved biosynthetic capabilities. In this review, we focus on the molecular tools and engineering strategies that have recently empowered heterologous natural product biosynthesis. Copyright Â
© 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 26994377      PMCID: PMC5026534          DOI: 10.1016/j.copbio.2016.02.033

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  65 in total

1.  A Highly Characterized Yeast Toolkit for Modular, Multipart Assembly.

Authors:  Michael E Lee; William C DeLoache; Bernardo Cervantes; John E Dueber
Journal:  ACS Synth Biol       Date:  2015-05-01       Impact factor: 5.110

2.  Multiplex assay for condition-dependent changes in protein-protein interactions.

Authors:  Ulrich Schlecht; Molly Miranda; Sundari Suresh; Ronald W Davis; Robert P St Onge
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-21       Impact factor: 11.205

3.  Using unnatural protein fusions to engineer resveratrol biosynthesis in yeast and Mammalian cells.

Authors:  Yansheng Zhang; Song-Zhe Li; Jia Li; Xiangqing Pan; Rebecca E Cahoon; Jan G Jaworski; Xuemin Wang; Joseph M Jez; Feng Chen; Oliver Yu
Journal:  J Am Chem Soc       Date:  2006-10-11       Impact factor: 15.419

4.  Short Synthetic Terminators for Improved Heterologous Gene Expression in Yeast.

Authors:  Kathleen A Curran; Nicholas J Morse; Kelly A Markham; Allison M Wagman; Akash Gupta; Hal S Alper
Journal:  ACS Synth Biol       Date:  2015-02-25       Impact factor: 5.110

Review 5.  Advancing secondary metabolite biosynthesis in yeast with synthetic biology tools.

Authors:  Michael S Siddiqui; Kate Thodey; Isis Trenchard; Christina D Smolke
Journal:  FEMS Yeast Res       Date:  2012-01-11       Impact factor: 2.796

6.  Refactoring the nitrogen fixation gene cluster from Klebsiella oxytoca.

Authors:  Karsten Temme; Dehua Zhao; Christopher A Voigt
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-16       Impact factor: 11.205

7.  Reiterative Recombination for the in vivo assembly of libraries of multigene pathways.

Authors:  Laura M Wingler; Virginia W Cornish
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-26       Impact factor: 11.205

8.  Diversion of flux toward sesquiterpene production in Saccharomyces cerevisiae by fusion of host and heterologous enzymes.

Authors:  Line Albertsen; Yun Chen; Lars S Bach; Stig Rattleff; Jerome Maury; Susanne Brix; Jens Nielsen; Uffe H Mortensen
Journal:  Appl Environ Microbiol       Date:  2010-12-10       Impact factor: 4.792

9.  A condition-specific codon optimization approach for improved heterologous gene expression in Saccharomyces cerevisiae.

Authors:  Amanda M Lanza; Kathleen A Curran; Lindsey G Rey; Hal S Alper
Journal:  BMC Syst Biol       Date:  2014-03-17

10.  DNA assembler, an in vivo genetic method for rapid construction of biochemical pathways.

Authors:  Zengyi Shao; Hua Zhao; Huimin Zhao
Journal:  Nucleic Acids Res       Date:  2008-12-12       Impact factor: 16.971

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  14 in total

Review 1.  Fungal secondary metabolism: regulation, function and drug discovery.

Authors:  Nancy P Keller
Journal:  Nat Rev Microbiol       Date:  2019-03       Impact factor: 60.633

2.  Production of semi-biosynthetic nepetalactone in yeast.

Authors:  John M Billingsley; Jose L Anguiano; Yi Tang
Journal:  J Ind Microbiol Biotechnol       Date:  2019-06-05       Impact factor: 3.346

Review 3.  Breaking the silence: new strategies for discovering novel natural products.

Authors:  Hengqian Ren; Bin Wang; Huimin Zhao
Journal:  Curr Opin Biotechnol       Date:  2017-03-11       Impact factor: 9.740

4.  Engineering the biocatalytic selectivity of iridoid production in Saccharomyces cerevisiae.

Authors:  John M Billingsley; Anthony B DeNicola; Joyann S Barber; Man-Cheng Tang; Joe Horecka; Angela Chu; Neil K Garg; Yi Tang
Journal:  Metab Eng       Date:  2017-09-20       Impact factor: 9.783

5.  Investigating Fungal Biosynthetic Pathways Using Heterologous Gene Expression: Fusarium sp. as a Heterologous Host.

Authors:  Mikkel Rank Nielsen; Jens Laurids Sørensen
Journal:  Methods Mol Biol       Date:  2022

6.  Saccharomyces cerevisiae as a Heterologous Host for Natural Products.

Authors:  Maximilian Otto; Dany Liu; Verena Siewers
Journal:  Methods Mol Biol       Date:  2022

Review 7.  A Natural Product Chemist's Guide to Unlocking Silent Biosynthetic Gene Clusters.

Authors:  Brett C Covington; Fei Xu; Mohammad R Seyedsayamdost
Journal:  Annu Rev Biochem       Date:  2021-04-13       Impact factor: 27.258

Review 8.  Properties of alternative microbial hosts used in synthetic biology: towards the design of a modular chassis.

Authors:  Juhyun Kim; Manuel Salvador; Elizabeth Saunders; Jaime González; Claudio Avignone-Rossa; Jose Ignacio Jiménez
Journal:  Essays Biochem       Date:  2016-11-30       Impact factor: 8.000

9.  Genetic circuit design automation for yeast.

Authors:  Ye Chen; Shuyi Zhang; Eric M Young; Timothy S Jones; Douglas Densmore; Christopher A Voigt
Journal:  Nat Microbiol       Date:  2020-08-03       Impact factor: 17.745

10.  Engineering biosynthesis of the anticancer alkaloid noscapine in yeast.

Authors:  Yanran Li; Christina D Smolke
Journal:  Nat Commun       Date:  2016-07-05       Impact factor: 14.919

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