Literature DB >> 25686303

Short Synthetic Terminators for Improved Heterologous Gene Expression in Yeast.

Kathleen A Curran1, Nicholas J Morse1, Kelly A Markham1, Allison M Wagman1, Akash Gupta1, Hal S Alper1,2.   

Abstract

Terminators play an important role both in completing the transcription process and impacting mRNA half-life. As such, terminators are an important synthetic component considered in applications such as heterologous gene expression and metabolic engineering. Here, we describe a panel of short (35-70 bp) synthetic terminators that can be used for modulating gene expression in yeast. The best of these synthetic terminator resulted in 3.7-fold more fluorescent protein output and 4.4-fold increase in transcript level compared to that with the commonly used CYC1 terminator. These synthetic terminators offer several advantages over native sequences, including an easily synthesized short length, minimal sequence homology to native sequences, and similar or better performance characteristics than those of commonly used longer terminators. Furthermore, the synthetic terminators are highly functional in both Saccharomyces cerevisiae and an alternative yeast, Yarrowia lipolytica, demonstrating that these synthetic designs are transferrable between diverse yeast species.

Entities:  

Keywords:  3′ UTR; Saccharomyces cerevisiae; heterologous gene expression; terminator; yeast

Mesh:

Substances:

Year:  2015        PMID: 25686303     DOI: 10.1021/sb5003357

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  52 in total

1.  Automated design of thousands of nonrepetitive parts for engineering stable genetic systems.

Authors:  Ayaan Hossain; Eriberto Lopez; Sean M Halper; Daniel P Cetnar; Alexander C Reis; Devin Strickland; Eric Klavins; Howard M Salis
Journal:  Nat Biotechnol       Date:  2020-07-13       Impact factor: 54.908

Review 2.  Engineering Yarrowia lipolytica for Use in Biotechnological Applications: A Review of Major Achievements and Recent Innovations.

Authors:  Catherine Madzak
Journal:  Mol Biotechnol       Date:  2018-08       Impact factor: 2.695

3.  Pac1/LIS1 stabilizes an uninhibited conformation of dynein to coordinate its localization and activity.

Authors:  Matthew G Marzo; Jacqueline M Griswold; Steven M Markus
Journal:  Nat Cell Biol       Date:  2020-04-27       Impact factor: 28.824

Review 4.  Synthetic biology, systems biology, and metabolic engineering of Yarrowia lipolytica toward a sustainable biorefinery platform.

Authors:  Jingbo Ma; Yang Gu; Monireh Marsafari; Peng Xu
Journal:  J Ind Microbiol Biotechnol       Date:  2020-07-04       Impact factor: 3.346

Review 5.  Recent advances of molecular toolbox construction expand Pichia pastoris in synthetic biology applications.

Authors:  Zhen Kang; Hao Huang; Yunfeng Zhang; Guocheng Du; Jian Chen
Journal:  World J Microbiol Biotechnol       Date:  2016-11-30       Impact factor: 3.312

Review 6.  Technology development for natural product biosynthesis in Saccharomyces cerevisiae.

Authors:  John M Billingsley; Anthony B DeNicola; Yi Tang
Journal:  Curr Opin Biotechnol       Date:  2016-03-16       Impact factor: 9.740

7.  Genetic circuit design automation for yeast.

Authors:  Ye Chen; Shuyi Zhang; Eric M Young; Timothy S Jones; Douglas Densmore; Christopher A Voigt
Journal:  Nat Microbiol       Date:  2020-08-03       Impact factor: 17.745

8.  Hybrid promoter engineering strategies in Yarrowia lipolytica: isoamyl alcohol production as a test study.

Authors:  Yu Zhao; Shiqi Liu; Zhihui Lu; Baixiang Zhao; Shuhui Wang; Cuiying Zhang; Dongguang Xiao; Jee Loon Foo; Aiqun Yu
Journal:  Biotechnol Biofuels       Date:  2021-07-02       Impact factor: 6.040

9.  Biodegradation of aromatic pollutants meets synthetic biology.

Authors:  Liang Xiang; Guoqiang Li; Luan Wen; Cong Su; Yong Liu; Hongzhi Tang; Junbiao Dai
Journal:  Synth Syst Biotechnol       Date:  2021-07-01

Review 10.  Learning the Regulatory Code of Gene Expression.

Authors:  Jan Zrimec; Filip Buric; Mariia Kokina; Victor Garcia; Aleksej Zelezniak
Journal:  Front Mol Biosci       Date:  2021-06-10
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