Literature DB >> 35524045

Investigating Fungal Biosynthetic Pathways Using Heterologous Gene Expression: Fusarium sp. as a Heterologous Host.

Mikkel Rank Nielsen1, Jens Laurids Sørensen2.   

Abstract

Heterologous expression of uncharacterized biosynthetic gene clusters is a popular strategy for exploring the chemical potential of filamentous fungi. Here, we describe the process of PCR-amplifying fungal gene clusters and re-assembling them in a cloning vector via target-associated recombination in Saccharomyces cerevisiae . The gene cluster-carrying construct is validated and used to transform protoplasts of Fusarium graminearum , a well-studied host that is able to express the gene cluster. Chemical analysis of transformants expressing biosynthetic genes can lead to the detection and isolation of novel compounds, such as polyketides.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Chromosomal integration; Fungi; Fusarium; Gene cluster; Heterologous expression; Homologous recombination; Protoplast; Protoplast-mediated transformation; TAR

Mesh:

Year:  2022        PMID: 35524045     DOI: 10.1007/978-1-0716-2273-5_4

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  22 in total

Review 1.  Fungal secondary metabolism: regulation, function and drug discovery.

Authors:  Nancy P Keller
Journal:  Nat Rev Microbiol       Date:  2019-03       Impact factor: 60.633

2.  Hidden biosynthetic treasures brought to light.

Authors:  Christian Hertweck
Journal:  Nat Chem Biol       Date:  2009-07       Impact factor: 15.040

3.  Metabolic Pathway Gene Clusters in Filamentous Fungi

Authors: 
Journal:  Fungal Genet Biol       Date:  1997-02       Impact factor: 3.495

Review 4.  Regulation of fungal secondary metabolism.

Authors:  Axel A Brakhage
Journal:  Nat Rev Microbiol       Date:  2012-11-26       Impact factor: 60.633

5.  Direct cloning and refactoring of a silent lipopeptide biosynthetic gene cluster yields the antibiotic taromycin A.

Authors:  Kazuya Yamanaka; Kirk A Reynolds; Roland D Kersten; Katherine S Ryan; David J Gonzalez; Victor Nizet; Pieter C Dorrestein; Bradley S Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

Review 6.  Recent advances in reconstructing microbial secondary metabolites biosynthesis in Aspergillus spp.

Authors:  Yi He; Bin Wang; Wanping Chen; Russell J Cox; Jingren He; Fusheng Chen
Journal:  Biotechnol Adv       Date:  2018-02-05       Impact factor: 14.227

7.  Heterologous expression of intact biosynthetic gene clusters in Fusarium graminearum.

Authors:  Mikkel Rank Nielsen; Rasmus Dam Wollenberg; Klaus Ringsborg Westphal; Teis Esben Sondergaard; Reinhard Wimmer; Donald Max Gardiner; Jens Laurids Sørensen
Journal:  Fungal Genet Biol       Date:  2019-07-04       Impact factor: 3.495

Review 8.  Technology development for natural product biosynthesis in Saccharomyces cerevisiae.

Authors:  John M Billingsley; Anthony B DeNicola; Yi Tang
Journal:  Curr Opin Biotechnol       Date:  2016-03-16       Impact factor: 9.740

Review 9.  Transformation-associated recombination (TAR) cloning for genomics studies and synthetic biology.

Authors:  Natalay Kouprina; Vladimir Larionov
Journal:  Chromosoma       Date:  2016-04-26       Impact factor: 4.316

10.  A scalable platform to identify fungal secondary metabolites and their gene clusters.

Authors:  Kenneth D Clevenger; Jin Woo Bok; Rosa Ye; Galen P Miley; Maria H Verdan; Thomas Velk; Cynthia Chen; KaHoua Yang; Matthew T Robey; Peng Gao; Matthew Lamprecht; Paul M Thomas; Md Nurul Islam; Jonathan M Palmer; Chengcang C Wu; Nancy P Keller; Neil L Kelleher
Journal:  Nat Chem Biol       Date:  2017-06-12       Impact factor: 15.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.