Literature DB >> 26907414

Experimental implementations of 2D IR spectroscopy through a horizontal pulse shaper design and a focal plane array detector.

Ayanjeet Ghosh, Arnaldo L Serrano, Tracey A Oudenhoven, Joshua S Ostrander, Elliot C Eklund, Alexander F Blair, Martin T Zanni.   

Abstract

Aided by advances in optical engineering, two-dimensional infrared spectroscopy (2D IR) has developed into a promising method for probing structural dynamics in biophysics and material science. We report two new advances for 2D IR spectrometers. First, we report a fully reflective and totally horizontal pulse shaper, which significantly simplifies alignment. Second, we demonstrate the applicability of mid-IR focal plane arrays (FPAs) as suitable detectors in 2D IR experiments. FPAs have more pixels than conventional linear arrays and can be used to multiplex optical detection. We simultaneously measure the spectra of a reference beam, which improves the signal-to-noise by a factor of 4; and two additional beams that are orthogonally polarized probe pulses for 2D IR anisotropy experiments.

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Year:  2016        PMID: 26907414      PMCID: PMC5301998          DOI: 10.1364/OL.41.000524

Source DB:  PubMed          Journal:  Opt Lett        ISSN: 0146-9592            Impact factor:   3.776


  28 in total

1.  Broadband astigmatism-corrected Czerny-Turner spectrometer.

Authors:  Kye-Sung Lee; Kevin P Thompson; Jannick P Rolland
Journal:  Opt Express       Date:  2010-10-25       Impact factor: 3.894

2.  Two-dimensional Fourier transform spectroscopy in the pump-probe geometry.

Authors:  Lauren P Deflores; Rebecca A Nicodemus; Andrei Tokmakoff
Journal:  Opt Lett       Date:  2007-10-15       Impact factor: 3.776

3.  Observation of ice-like water layers at an aqueous protein surface.

Authors:  Konrad Meister; Simona Strazdaite; Arthur L DeVries; Stephan Lotze; Luuk L C Olijve; Ilja K Voets; Huib J Bakker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-02       Impact factor: 11.205

4.  Wide-field FTIR microscopy using mid-IR pulse shaping.

Authors:  Arnaldo L Serrano; Ayanjeet Ghosh; Joshua S Ostrander; Martin T Zanni
Journal:  Opt Express       Date:  2015-07-13       Impact factor: 3.894

5.  Protein dynamics studied with ultrafast two-dimensional infrared vibrational echo spectroscopy.

Authors:  Megan C Thielges; Michael D Fayer
Journal:  Acc Chem Res       Date:  2012-03-20       Impact factor: 22.384

6.  Structural dynamics inside a functionalized metal-organic framework probed by ultrafast 2D IR spectroscopy.

Authors:  Jun Nishida; Amr Tamimi; Honghan Fei; Sonja Pullen; Sascha Ott; Seth M Cohen; Michael D Fayer
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-15       Impact factor: 11.205

Review 7.  How to turn your pump-probe instrument into a multidimensional spectrometer: 2D IR and Vis spectroscopies via pulse shaping.

Authors:  Sang-Hee Shim; Martin T Zanni
Journal:  Phys Chem Chem Phys       Date:  2008-12-10       Impact factor: 3.676

8.  2D IR spectroscopy using four-wave mixing, pulse shaping, and IR upconversion: a quantitative comparison.

Authors:  William Rock; Yun-Liang Li; Philip Pagano; Christopher M Cheatum
Journal:  J Phys Chem A       Date:  2013-05-30       Impact factor: 2.781

9.  Mercury cadmium telluride focal-plane array detection for mid-infrared Fourier-transform spectroscopic imaging.

Authors:  L H Kidder; I W Levin; E N Lewis; V D Kleiman; E J Heilweil
Journal:  Opt Lett       Date:  1997-05-15       Impact factor: 3.776

10.  Two-dimensional infrared spectroscopy reveals the complex behaviour of an amyloid fibril inhibitor.

Authors:  Chris T Middleton; Peter Marek; Ping Cao; Chi-cheng Chiu; Sadanand Singh; Ann Marie Woys; Juan J de Pablo; Daniel P Raleigh; Martin T Zanni
Journal:  Nat Chem       Date:  2012-03-11       Impact factor: 24.427

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  12 in total

Review 1.  Watching Proteins Wiggle: Mapping Structures with Two-Dimensional Infrared Spectroscopy.

Authors:  Ayanjeet Ghosh; Joshua S Ostrander; Martin T Zanni
Journal:  Chem Rev       Date:  2017-01-06       Impact factor: 60.622

2.  Transparent window 2D IR spectroscopy of proteins.

Authors:  Megan C Thielges
Journal:  J Chem Phys       Date:  2021-07-28       Impact factor: 3.488

3.  A Different hIAPP Polymorph Is Observed in Human Serum Than in Aqueous Buffer: Demonstration of a New Method for Studying Amyloid Fibril Structure Using Infrared Spectroscopy.

Authors:  Caitlyn R Fields; Sidney S Dicke; Megan K Petti; Martin T Zanni; Justin P Lomont
Journal:  J Phys Chem Lett       Date:  2020-07-24       Impact factor: 6.475

4.  Spectroscopic Signature for Stable β-Amyloid Fibrils versus β-Sheet-Rich Oligomers.

Authors:  Justin P Lomont; Kacie L Rich; Michał Maj; Jia-Jung Ho; Joshua S Ostrander; Martin T Zanni
Journal:  J Phys Chem B       Date:  2017-12-27       Impact factor: 2.991

5.  Solvent-Independent Anharmonicity for Carbonyl Oscillators.

Authors:  Samuel H Schneider; Huong T Kratochvil; Martin T Zanni; Steven G Boxer
Journal:  J Phys Chem B       Date:  2017-03-08       Impact factor: 2.991

6.  Monolayer Sensitivity Enables a 2D IR Spectroscopic Immuno-biosensor for Studying Protein Structures: Application to Amyloid Polymorphs.

Authors:  Joshua S Ostrander; Justin P Lomont; Kacie L Rich; Vivek Saraswat; Benjamin R Feingold; Megan K Petti; Erin R Birdsall; Michael S Arnold; Martin T Zanni
Journal:  J Phys Chem Lett       Date:  2019-06-27       Impact factor: 6.475

7.  Shot-to-shot 2D IR spectroscopy at 100 kHz using a Yb laser and custom-designed electronics.

Authors:  Kieran M Farrell; Josh S Ostrander; Andrew C Jones; Baichhabi R Yakami; Sidney S Dicke; Chris T Middleton; Peter Hamm; Martin T Zanni
Journal:  Opt Express       Date:  2020-10-26       Impact factor: 3.894

8.  Phase stable, shot-to-shot measurement of third- and fifth-order two-quantum correlation spectra using a pulse shaper in the pump-probe geometry.

Authors:  Kieran M Farrell; Martin T Zanni
Journal:  J Chem Phys       Date:  2022-07-07       Impact factor: 4.304

9.  Not All β-Sheets Are the Same: Amyloid Infrared Spectra, Transition Dipole Strengths, and Couplings Investigated by 2D IR Spectroscopy.

Authors:  Justin P Lomont; Joshua S Ostrander; Jia-Jung Ho; Megan K Petti; Martin T Zanni
Journal:  J Phys Chem B       Date:  2017-09-19       Impact factor: 2.991

10.  Spatially Resolved Two-Dimensional Infrared Spectroscopy via Wide-Field Microscopy.

Authors:  Joshua S Ostrander; Arnaldo L Serrano; Ayanjeet Ghosh; Martin T Zanni
Journal:  ACS Photonics       Date:  2016-06-10       Impact factor: 7.529

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