Literature DB >> 31246039

Monolayer Sensitivity Enables a 2D IR Spectroscopic Immuno-biosensor for Studying Protein Structures: Application to Amyloid Polymorphs.

Joshua S Ostrander1, Justin P Lomont1, Kacie L Rich1, Vivek Saraswat2, Benjamin R Feingold1, Megan K Petti1, Erin R Birdsall1, Michael S Arnold2, Martin T Zanni1.   

Abstract

Immunosensors use antibodies to detect and quantify biomarkers of disease, though the sensors often lack structural information. We create a surface-sensitive two-dimensional infrared (2D IR) spectroscopic immunosensor for studying protein structures. We tether antibodies to a plasmonic surface, flow over a solution of amyloid proteins, and measure the 2D IR spectra. The 2D IR spectra provide a global assessment of antigen structure, and isotopically labeled proteins give residue-specific structural information. We report the 2D IR spectra of fibrils and monomers using a polyclonal antibody that targets human islet amyloid polypeptide (hIAPP). We observe two fibrillar polymorphs differing in their structure at the G24 residue, which supports the hypothesis that hIAPP polymorphs form from a common oligomeric intermediate. This work provides insight into the structure of hIAPP, establishes a new method for studying protein structures using 2D IR spectroscopy, and creates a spectroscopic immunoassay applicable for studying a wide range of biomarkers.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31246039      PMCID: PMC6823637          DOI: 10.1021/acs.jpclett.9b01267

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  41 in total

1.  Site-specific examination of secondary structure and orientation determination in membrane proteins: the peptidic (13)C=(18)O group as a novel infrared probe.

Authors:  J Torres; A Kukol; J M Goodman; I T Arkin
Journal:  Biopolymers       Date:  2001-11       Impact factor: 2.505

2.  Deamidation accelerates amyloid formation and alters amylin fiber structure.

Authors:  Emily B Dunkelberger; Lauren E Buchanan; Peter Marek; Ping Cao; Daniel P Raleigh; Martin T Zanni
Journal:  J Am Chem Soc       Date:  2012-07-17       Impact factor: 15.419

3.  Tracking fiber formation in human islet amyloid polypeptide with automated 2D-IR spectroscopy.

Authors:  David B Strasfeld; Yun L Ling; Sang-Hee Shim; Martin T Zanni
Journal:  J Am Chem Soc       Date:  2008-05-07       Impact factor: 15.419

Review 4.  Watching Proteins Wiggle: Mapping Structures with Two-Dimensional Infrared Spectroscopy.

Authors:  Ayanjeet Ghosh; Joshua S Ostrander; Martin T Zanni
Journal:  Chem Rev       Date:  2017-01-06       Impact factor: 60.622

5.  Three-dimensional structures by two-dimensional vibrational spectroscopy.

Authors:  Amanda Remorino; Robin M Hochstrasser
Journal:  Acc Chem Res       Date:  2012-03-29       Impact factor: 22.384

6.  Amylin found in amyloid deposits in human type 2 diabetes mellitus may be a hormone that regulates glycogen metabolism in skeletal muscle.

Authors:  G J Cooper; B Leighton; G D Dimitriadis; M Parry-Billings; J M Kowalchuk; K Howland; J B Rothbard; A C Willis; K B Reid
Journal:  Proc Natl Acad Sci U S A       Date:  1988-10       Impact factor: 11.205

7.  Comparison of methods for immobilization to carboxymethyl dextran sensor surfaces by analysis of the specific activity of monoclonal antibodies.

Authors:  B Johnsson; S Löfås; G Lindquist; A Edström; R M Müller Hillgren; A Hansson
Journal:  J Mol Recognit       Date:  1995 Jan-Apr       Impact factor: 2.137

8.  Single chain fragment variable recombinant antibody functionalized gold nanoparticles for a highly sensitive colorimetric immunoassay.

Authors:  Yang Liu; Yi Liu; Raymond L Mernaugh; Xiangqun Zeng
Journal:  Biosens Bioelectron       Date:  2009-02-27       Impact factor: 10.618

Review 9.  Conformational selection in amyloid-based immunotherapy: Survey of crystal structures of antibody-amyloid complexes.

Authors:  Buyong Ma; Jun Zhao; Ruth Nussinov
Journal:  Biochim Biophys Acta       Date:  2016-06-03

10.  Amyloid blood biomarker detects Alzheimer's disease.

Authors:  Andreas Nabers; Laura Perna; Julia Lange; Ute Mons; Jonas Schartner; Jörn Güldenhaupt; Kai-Uwe Saum; Shorena Janelidze; Bernd Holleczek; Dan Rujescu; Oskar Hansson; Klaus Gerwert; Hermann Brenner
Journal:  EMBO Mol Med       Date:  2018-05       Impact factor: 12.137

View more
  4 in total

1.  Structure Changes of a Membrane Polypeptide under an Applied Voltage Observed with Surface-Enhanced 2D IR Spectroscopy.

Authors:  Erin R Birdsall; Megan K Petti; Vivek Saraswat; Joshua S Ostrander; Michael S Arnold; Martin T Zanni
Journal:  J Phys Chem Lett       Date:  2021-02-12       Impact factor: 6.475

Review 2.  Coupling chemical biology and vibrational spectroscopy for studies of amyloids in vitro and in cells.

Authors:  Matthew D Watson; Jennifer C Lee
Journal:  Curr Opin Chem Biol       Date:  2021-06-26       Impact factor: 8.972

3.  Protein Dynamics by Two-Dimensional Infrared Spectroscopy.

Authors:  Goran W Tumbic; Md Yeathad Hossan; Megan C Thielges
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2021-07-27       Impact factor: 12.400

Review 4.  Applications of Single-Molecule Vibrational Spectroscopic Techniques for the Structural Investigation of Amyloid Oligomers.

Authors:  Katrin Ha Phuong Vu; Gerhard Heinrich Blankenburg; Leonardo Lesser-Rojas; Chia-Fu Chou
Journal:  Molecules       Date:  2022-09-30       Impact factor: 4.927

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.