Literature DB >> 19290321

How to turn your pump-probe instrument into a multidimensional spectrometer: 2D IR and Vis spectroscopies via pulse shaping.

Sang-Hee Shim1, Martin T Zanni.   

Abstract

We have recently developed a new and simple way of collecting 2D infrared and visible spectra that utilizes a pulse shaper and a partly collinear beam geometry. 2D IR and Vis spectroscopies are powerful tools for studying molecular structures and their dynamics. They can be used to correlate vibrational or electronic eigenstates, measure energy transfer rates, and quantify the dynamics of lineshapes, for instance, all with femtosecond time-resolution. As a result, they are finding use in systems that exhibit fast dynamics, such as sub-millisecond chemical and biological dynamics, and in hard-to-study environments, such as in membranes. While powerful, these techniques have been difficult to implement because they require a series of femtosecond pulses to be spatially and temporally overlapped with precise time-resolution and interferometric phase stability. However, many of the difficulties associated with implementing 2D spectroscopies are eliminated by using a pulse shaper and a simple beam geometry, which substantially lowers the technical barriers required for researchers to enter this exciting field while simultaneously providing many new capabilities. The aim of this paper is to provide an overview of the methods for collecting 2D spectra so that an outsider considering using 2D spectroscopy in their own research can judge which approach would be most suitable for their research aims. This paper focuses primarily on 2D IR spectroscopy, but also includes our recent work on adapting this technology to collecting 2D Vis spectra. We review work that has already been published as well as cover several topics that we have not reported previously, including phase cycling methods to remove background signals, eliminate unwanted scatter, and shift data collection into the rotating frame.

Entities:  

Mesh:

Year:  2008        PMID: 19290321      PMCID: PMC2821705          DOI: 10.1039/b813817f

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  47 in total

1.  Disentangling multidimensional femtosecond spectra of excitons by pulse shaping with coherent control.

Authors:  Darius Abramavicius; Shaul Mukamel
Journal:  J Chem Phys       Date:  2004-05-08       Impact factor: 3.488

2.  Active phase stabilization in Fourier-transform two-dimensional infrared spectroscopy.

Authors:  Victor Volkov; Roland Schanz; Peter Hamm
Journal:  Opt Lett       Date:  2005-08-01       Impact factor: 3.776

3.  Picosecond dynamics of a membrane protein revealed by 2D IR.

Authors:  Prabuddha Mukherjee; Itamar Kass; Isaiah T Arkin; Isaiah Arkin; Martin T Zanni
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

4.  Watching hydrogen-bond dynamics in a beta-turn by transient two-dimensional infrared spectroscopy.

Authors:  Christoph Kolano; Jan Helbing; Mariusz Kozinski; Wolfram Sander; Peter Hamm
Journal:  Nature       Date:  2006-11-23       Impact factor: 49.962

5.  Passively correcting phase drift in two-dimensional infrared spectroscopy.

Authors:  Feng Ding; Prabuddha Mukherjee; Martin T Zanni
Journal:  Opt Lett       Date:  2006-10-01       Impact factor: 3.776

6.  Identification of a novel human islet amyloid polypeptide beta-sheet domain and factors influencing fibrillogenesis.

Authors:  E T Jaikaran; C E Higham; L C Serpell; J Zurdo; M Gross; A Clark; P E Fraser
Journal:  J Mol Biol       Date:  2001-05-04       Impact factor: 5.469

7.  Measurement of photon echoes by use of femtosecond Fourier-transform spectral interferometry.

Authors:  J P Likforman; M Joffre; V Thierry-Mieg
Journal:  Opt Lett       Date:  1997-07-15       Impact factor: 3.776

8.  Facile collection of two-dimensional electronic spectra using femtosecond pulse-shaping Technology.

Authors:  Erik M Grumstrup; Sang-Hee Shim; Matthew A Montgomery; Niels H Damrauer; Martin T Zanni
Journal:  Opt Express       Date:  2007-12-10       Impact factor: 3.894

9.  Hydrogen bonds in liquid water are broken only fleetingly.

Authors:  J D Eaves; J J Loparo; C J Fecko; S T Roberts; A Tokmakoff; P L Geissler
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-31       Impact factor: 11.205

10.  Amide I vibrational dynamics of N-methylacetamide in polar solvents: the role of electrostatic interactions.

Authors:  M F DeCamp; L DeFlores; J M McCracken; A Tokmakoff; K Kwac; M Cho
Journal:  J Phys Chem B       Date:  2005-06-02       Impact factor: 2.991

View more
  54 in total

1.  The sulfated triphenyl methane derivative acid fuchsin is a potent inhibitor of amyloid formation by human islet amyloid polypeptide and protects against the toxic effects of amyloid formation.

Authors:  Fanling Meng; Andisheh Abedini; Annette Plesner; Chris T Middleton; Kathryn J Potter; Martin T Zanni; C Bruce Verchere; Daniel P Raleigh
Journal:  J Mol Biol       Date:  2010-05-07       Impact factor: 5.469

2.  Adding a dimension to the infrared spectra of interfaces using heterodyne detected 2D sum-frequency generation (HD 2D SFG) spectroscopy.

Authors:  Wei Xiong; Jennifer E Laaser; Randy D Mehlenbacher; Martin T Zanni
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

3.  Fully absorptive 3D IR spectroscopy using a dual mid-infrared pulse shaper.

Authors:  Sudipta S Mukherjee; David R Skoff; Chris T Middleton; Martin T Zanni
Journal:  J Chem Phys       Date:  2013-10-14       Impact factor: 3.488

4.  Time-resolved broadband Raman spectroscopies: a unified six-wave-mixing representation.

Authors:  Konstantin E Dorfman; Benjamin P Fingerhut; Shaul Mukamel
Journal:  J Chem Phys       Date:  2013-09-28       Impact factor: 3.488

5.  Simplified and economical 2D IR spectrometer design using a dual acousto-optic modulator.

Authors:  David R Skoff; Jennifer E Laaser; Sudipta S Mukherjee; Chris T Middleton; Martin T Zanni
Journal:  Chem Phys       Date:  2013-08-30       Impact factor: 2.348

6.  Residue-specific structural kinetics of proteins through the union of isotope labeling, mid-IR pulse shaping, and coherent 2D IR spectroscopy.

Authors:  Chris T Middleton; Ann Marie Woys; Sudipta S Mukherjee; Martin T Zanni
Journal:  Methods       Date:  2010-05-22       Impact factor: 3.608

7.  Coordination to lanthanide ions distorts binding site conformation in calmodulin.

Authors:  Sean C Edington; Andrea Gonzalez; Thomas R Middendorf; D Brent Halling; Richard W Aldrich; Carlos R Baiz
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-15       Impact factor: 11.205

8.  Ultrafast Dynamics at Lipid-Water Interfaces.

Authors:  Jennifer C Flanagan; Mason L Valentine; Carlos R Baiz
Journal:  Acc Chem Res       Date:  2020-08-31       Impact factor: 22.384

9.  A strongly absorbing class of non-natural labels for probing protein electrostatics and solvation with FTIR and 2D IR spectroscopies.

Authors:  Ann Marie Woys; Sudipta S Mukherjee; David R Skoff; Sean D Moran; Martin T Zanni
Journal:  J Phys Chem B       Date:  2013-04-15       Impact factor: 2.991

10.  Fast dynamics of HP35 for folded and urea-unfolded conditions.

Authors:  Jean K Chung; Megan C Thielges; Stephen R Lynch; Michael D Fayer
Journal:  J Phys Chem B       Date:  2012-08-29       Impact factor: 2.991

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.