Literature DB >> 26824757

Case-control data analysis for randomly pooled biomarkers.

Neil J Perkins1, Emily M Mitchell2, Robert H Lyles3, Enrique F Schisterman2.   

Abstract

Pooled study designs, where individual biospecimens are combined prior to measurement via a laboratory assay, can reduce lab costs while maintaining statistical efficiency. Analysis of the resulting pooled measurements, however, often requires specialized techniques. Existing methods can effectively estimate the relation between a binary outcome and a continuous pooled exposure when pools are matched on disease status. When pools are of mixed disease status, however, the existing methods may not be applicable. By exploiting characteristics of the gamma distribution, we propose a flexible method for estimating odds ratios from pooled measurements of mixed and matched status. We use simulation studies to compare consistency and efficiency of risk effect estimates from our proposed methods to existing methods. We then demonstrate the efficacy of our method applied to an analysis of pregnancy outcomes and pooled cytokine concentrations. Our proposed approach contributes to the toolkit of available methods for analyzing odds ratios of a pooled exposure, without restricting pools to be matched on a specific outcome.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Biomarkers; Gamma distribution; Odds ratio; Pooled specimens; Skewness

Mesh:

Substances:

Year:  2016        PMID: 26824757      PMCID: PMC5588030          DOI: 10.1002/bimj.201500010

Source DB:  PubMed          Journal:  Biom J        ISSN: 0323-3847            Impact factor:   2.207


  13 in total

1.  Using pooled exposure assessment to improve efficiency in case-control studies.

Authors:  C R Weinberg; D M Umbach
Journal:  Biometrics       Date:  1999-09       Impact factor: 2.571

2.  Pooling biospecimens and limits of detection: effects on ROC curve analysis.

Authors:  Sunni L Mumford; Enrique F Schisterman; Albert Vexler; Aiyi Liu
Journal:  Biostatistics       Date:  2006-03-10       Impact factor: 5.899

3.  Specimen pooling for efficient use of biospecimens in studies of time to a common event.

Authors:  Paramita Saha-Chaudhuri; Clarice R Weinberg
Journal:  Am J Epidemiol       Date:  2013-05-02       Impact factor: 4.897

Review 4.  Pooled biological specimens for human biomonitoring of environmental chemicals: opportunities and limitations.

Authors:  Amy L Heffernan; Lesa L Aylward; Leisa-Maree L Toms; Peter D Sly; Matthew Macleod; Jochen F Mueller
Journal:  J Expo Sci Environ Epidemiol       Date:  2013-11-06       Impact factor: 5.563

5.  Positing, fitting, and selecting regression models for pooled biomarker data.

Authors:  Emily M Mitchell; Robert H Lyles; Enrique F Schisterman
Journal:  Stat Med       Date:  2015-04-06       Impact factor: 2.373

6.  Pooled exposure assessment for matched case-control studies.

Authors:  Paramita Saha-Chaudhuri; David M Umbach; Clarice R Weinberg
Journal:  Epidemiology       Date:  2011-09       Impact factor: 4.822

7.  Detection of acute infections during HIV testing in North Carolina.

Authors:  Christopher D Pilcher; Susan A Fiscus; Trang Q Nguyen; Evelyn Foust; Leslie Wolf; Del Williams; Rhonda Ashby; Judy Owen O'Dowd; J Todd McPherson; Brandt Stalzer; Lisa Hightow; William C Miller; Joseph J Eron; Myron S Cohen; Peter A Leone
Journal:  N Engl J Med       Date:  2005-05-05       Impact factor: 91.245

8.  Binary regression analysis with pooled exposure measurements: a regression calibration approach.

Authors:  Zhiwei Zhang; Paul S Albert
Journal:  Biometrics       Date:  2010-07-21       Impact factor: 2.571

9.  Circulating levels of cytokines during pregnancy: thrombopoietin is elevated in miscarriage.

Authors:  Brian W Whitcomb; Enrique F Schisterman; Mark A Klebanoff; Mona Baumgarten; Xiaoping Luo; Nasser Chegini
Journal:  Fertil Steril       Date:  2007-08-13       Impact factor: 7.329

10.  Pooling of urine samples for screening for Neisseria gonorrhoeae by ligase chain reaction: accuracy and application.

Authors:  K A Kacena; S B Quinn; S C Hartman; T C Quinn; C A Gaydos
Journal:  J Clin Microbiol       Date:  1998-12       Impact factor: 5.948

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  2 in total

1.  Exposure to Persistent Organic Pollutants and Birth Characteristics: The Upstate KIDS Study.

Authors:  Griffith A Bell; Neil Perkins; Germaine M Buck Louis; Kurunthachalam Kannan; Erin M Bell; Chongjing Gao; Edwina H Yeung
Journal:  Epidemiology       Date:  2019-11       Impact factor: 4.822

2.  Logistic regression with a continuous exposure measured in pools and subject to errors.

Authors:  Dane R Van Domelen; Emily M Mitchell; Neil J Perkins; Enrique F Schisterman; Amita K Manatunga; Yijian Huang; Robert H Lyles
Journal:  Stat Med       Date:  2018-07-18       Impact factor: 2.373

  2 in total

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