Literature DB >> 26713186

Semi-automated identification of cones in the human retina using circle Hough transform.

Danuta M Bukowska1, Avenell L Chew1, Emily Huynh2, Irwin Kashani3, Sue Ling Wan1, Pak Ming Wan3, Fred K Chen4.   

Abstract

A large number of human retinal diseases are characterized by a progressive loss of cones, the photoreceptors critical for visual acuity and color perception. Adaptive Optics (AO) imaging presents a potential method to study these cells in vivo. However, AO imaging in ophthalmology is a relatively new phenomenon and quantitative analysis of these images remains difficult and tedious using manual methods. This paper illustrates a novel semi-automated quantitative technique enabling registration of AO images to macular landmarks, cone counting and its radius quantification at specified distances from the foveal center. The new cone counting approach employs the circle Hough transform (cHT) and is compared to automated counting methods, as well as arbitrated manual cone identification. We explore the impact of varying the circle detection parameter on the validity of cHT cone counting and discuss the potential role of using this algorithm in detecting both cones and rods separately.

Entities:  

Keywords:  (100.0100) Image processing; (110.1080) Active or adaptive optics; (170.3880) Medical and biological imaging; (170.4470) Ophthalmology

Year:  2015        PMID: 26713186      PMCID: PMC4679246          DOI: 10.1364/BOE.6.004676

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  25 in total

Review 1.  High-speed optical coherence tomography: basics and applications.

Authors:  Maciej Wojtkowski
Journal:  Appl Opt       Date:  2010-06-01       Impact factor: 1.980

2.  High-speed, high-resolution optical coherence tomography retinal imaging with a frequency-swept laser at 850 nm.

Authors:  V J Srinivasan; R Huber; I Gorczynska; J G Fujimoto; J Y Jiang; P Reisen; A E Cable
Journal:  Opt Lett       Date:  2007-02-15       Impact factor: 3.776

Review 3.  Design, analysis, and interpretation of method-comparison studies.

Authors:  Sandra K Hanneman
Journal:  AACN Adv Crit Care       Date:  2008 Apr-Jun

4.  Automated analysis of differential interference contrast microscopy images of the foveal cone mosaic.

Authors:  David H Wojtas; Bing Wu; Peter K Ahnelt; Philip J Bones; R P Millane
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2008-05       Impact factor: 2.129

5.  The adaptive hough transform.

Authors:  J Illingworth; J Kittler
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1987-05       Impact factor: 6.226

6.  Statistical methods for assessing agreement between two methods of clinical measurement.

Authors:  J M Bland; D G Altman
Journal:  Lancet       Date:  1986-02-08       Impact factor: 79.321

7.  Reliability of cone counts using an adaptive optics retinal camera.

Authors:  Mélanie Bidaut Garnier; Mathieu Flores; Guillaume Debellemanière; Marc Puyraveau; Perle Tumahai; Mathieu Meillat; Claire Schwartz; Michel Montard; Bernard Delbosc; Maher Saleh
Journal:  Clin Exp Ophthalmol       Date:  2014-07-25       Impact factor: 4.207

8.  In vivo imaging of human retinal microvasculature using adaptive optics scanning light ophthalmoscope fluorescein angiography.

Authors:  Alexander Pinhas; Michael Dubow; Nishit Shah; Toco Y Chui; Drew Scoles; Yusufu N Sulai; Rishard Weitz; Joseph B Walsh; Joseph Carroll; Alfredo Dubra; Richard B Rosen
Journal:  Biomed Opt Express       Date:  2013-07-12       Impact factor: 3.732

9.  Image quality improvement in adaptive optics scanning laser ophthalmoscopy assisted capillary visualization using B-spline-based elastic image registration.

Authors:  Akihito Uji; Sotaro Ooto; Masanori Hangai; Shigeta Arichika; Nagahisa Yoshimura
Journal:  PLoS One       Date:  2013-11-12       Impact factor: 3.240

10.  Cone photoreceptor definition on adaptive optics retinal imaging.

Authors:  Manickam Nick Muthiah; Carlos Gias; Fred Kuanfu Chen; Joe Zhong; Zoe McClelland; Ferenc B Sallo; Tunde Peto; Peter J Coffey; Lyndon da Cruz
Journal:  Br J Ophthalmol       Date:  2014-04-11       Impact factor: 4.638

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  19 in total

1.  Unsupervised identification of cone photoreceptors in non-confocal adaptive optics scanning light ophthalmoscope images.

Authors:  Christos Bergeles; Adam M Dubis; Benjamin Davidson; Melissa Kasilian; Angelos Kalitzeos; Joseph Carroll; Alfredo Dubra; Michel Michaelides; Sebastien Ourselin
Journal:  Biomed Opt Express       Date:  2017-05-26       Impact factor: 3.732

2.  Use of focus measure operators for characterization of flood illumination adaptive optics ophthalmoscopy image quality.

Authors:  David Alonso-Caneiro; Danuta M Sampson; Avenell L Chew; Michael J Collins; Fred K Chen
Journal:  Biomed Opt Express       Date:  2018-01-18       Impact factor: 3.732

3.  Automated Photoreceptor Cell Identification on Nonconfocal Adaptive Optics Images Using Multiscale Circular Voting.

Authors:  Jianfei Liu; HaeWon Jung; Alfredo Dubra; Johnny Tam
Journal:  Invest Ophthalmol Vis Sci       Date:  2017-09-01       Impact factor: 4.799

4.  Cone Photoreceptor Cell Segmentation and Diameter Measurement on Adaptive Optics Images Using Circularly Constrained Active Contour Model.

Authors:  Jianfei Liu; HaeWon Jung; Alfredo Dubra; Johnny Tam
Journal:  Invest Ophthalmol Vis Sci       Date:  2018-09-04       Impact factor: 4.799

5.  Fully Automated Estimation of Spacing and Density for Retinal Mosaics.

Authors:  Robert F Cooper; Geoffrey K Aguirre; Jessica I W Morgan
Journal:  Transl Vis Sci Technol       Date:  2019-10-17       Impact factor: 3.283

6.  Automatic Detection of Cone Photoreceptors With Fully Convolutional Networks.

Authors:  Jared Hamwood; David Alonso-Caneiro; Danuta M Sampson; Michael J Collins; Fred K Chen
Journal:  Transl Vis Sci Technol       Date:  2019-11-12       Impact factor: 3.283

7.  Agreement in Cone Density Derived from Gaze-Directed Single Images Versus Wide-Field Montage Using Adaptive Optics Flood Illumination Ophthalmoscopy.

Authors:  Avenell L Chew; Danuta M Sampson; Irwin Kashani; Fred K Chen
Journal:  Transl Vis Sci Technol       Date:  2017-12-22       Impact factor: 3.283

8.  The Reliability of Cone Density Measurements in the Presence of Rods.

Authors:  Jessica I W Morgan; Grace K Vergilio; Jessica Hsu; Alfredo Dubra; Robert F Cooper
Journal:  Transl Vis Sci Technol       Date:  2018-06-22       Impact factor: 3.283

9.  RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images.

Authors:  David Cunefare; Alison L Huckenpahler; Emily J Patterson; Alfredo Dubra; Joseph Carroll; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2019-07-08       Impact factor: 3.562

10.  Retinal Differential Light Sensitivity Variation Across the Macula in Healthy Subjects: Importance of Cone Separation and Loci Eccentricity.

Authors:  Danuta M Sampson; Danial Roshandel; Avenell L Chew; Yufei Wang; Paul G Stevenson; Matthew N Cooper; Elaine Ong; Lawrence Wong; Jonathan La; David Alonso-Caneiro; Enid Chelva; Jane C Khan; David D Sampson; Fred K Chen
Journal:  Transl Vis Sci Technol       Date:  2021-05-03       Impact factor: 3.283

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