Literature DB >> 28663928

Unsupervised identification of cone photoreceptors in non-confocal adaptive optics scanning light ophthalmoscope images.

Christos Bergeles1, Adam M Dubis2, Benjamin Davidson1, Melissa Kasilian2, Angelos Kalitzeos2, Joseph Carroll3, Alfredo Dubra4, Michel Michaelides2, Sebastien Ourselin1.   

Abstract

Precise measurements of photoreceptor numerosity and spatial arrangement are promising biomarkers for the early detection of retinal pathologies and may be valuable in the evaluation of retinal therapies. Adaptive optics scanning light ophthalmoscopy (AOSLO) is a method of imaging that corrects for aberrations of the eye to acquire high-resolution images that reveal the photoreceptor mosaic. These images are typically graded manually by experienced observers, obviating the robust, large-scale use of the technology. This paper addresses unsupervised automated detection of cones in non-confocal, split-detection AOSLO images. Our algorithm leverages the appearance of split-detection images to create a cone model that is used for classification. Results show that it compares favorably to the state-of-the-art, both for images of healthy retinas and for images from patients affected by Stargardt disease. The algorithm presented also compares well to manual annotation while excelling in speed.

Entities:  

Keywords:  (100.0100) Image processing; (110.1080) Active or adaptive optics; (170.4470) Ophthalmology

Year:  2017        PMID: 28663928      PMCID: PMC5480451          DOI: 10.1364/BOE.8.003081

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  19 in total

1.  A fully automated approach to segmentation of irregularly shaped cellular structures in EM images.

Authors:  Aurélien Lucchi; Kevin Smith; Radhakrishna Achanta; Vincent Lepetit; Pascal Fua
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

2.  Semi-automated identification of cones in the human retina using circle Hough transform.

Authors:  Danuta M Bukowska; Avenell L Chew; Emily Huynh; Irwin Kashani; Sue Ling Wan; Pak Ming Wan; Fred K Chen
Journal:  Biomed Opt Express       Date:  2015-11-03       Impact factor: 3.732

3.  Automated identification of cone photoreceptors in adaptive optics retinal images.

Authors:  Kaccie Y Li; Austin Roorda
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2007-05       Impact factor: 2.129

4.  An evaluation of the effectiveness of adaptive histogram equalization for contrast enhancement.

Authors:  J B Zimmerman; S M Pizer; E V Staab; J R Perry; W McCartney; B C Brenton
Journal:  IEEE Trans Med Imaging       Date:  1988       Impact factor: 10.048

5.  Learning to detect cells using non-overlapping extremal regions.

Authors:  Carlos Arteta; Victor Lempitsky; J Alison Noble; Andrew Zisserman
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

6.  Accurate cell segmentation in microscopy images using membrane patterns.

Authors:  Sotiris Dimopoulos; Christian E Mayer; Fabian Rudolf; Joerg Stelling
Journal:  Bioinformatics       Date:  2014-05-21       Impact factor: 6.937

7.  Methods for investigating the local spatial anisotropy and the preferred orientation of cones in adaptive optics retinal images.

Authors:  Robert F Cooper; Marco Lombardo; Joseph Carroll; Kenneth R Sloan; Giuseppe Lombardo
Journal:  Vis Neurosci       Date:  2016-01       Impact factor: 3.241

Review 8.  Adaptive optics technology for high-resolution retinal imaging.

Authors:  Marco Lombardo; Sebastiano Serrao; Nicholas Devaney; Mariacristina Parravano; Giuseppe Lombardo
Journal:  Sensors (Basel)       Date:  2012-12-27       Impact factor: 3.576

9.  Noninvasive imaging of the human rod photoreceptor mosaic using a confocal adaptive optics scanning ophthalmoscope.

Authors:  Alfredo Dubra; Yusufu Sulai; Jennifer L Norris; Robert F Cooper; Adam M Dubis; David R Williams; Joseph Carroll
Journal:  Biomed Opt Express       Date:  2011-06-08       Impact factor: 3.732

10.  Automatic cone photoreceptor segmentation using graph theory and dynamic programming.

Authors:  Stephanie J Chiu; Yuliya Lokhnygina; Adam M Dubis; Alfredo Dubra; Joseph Carroll; Joseph A Izatt; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2013-05-22       Impact factor: 3.732

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  13 in total

1.  Comparison of confocal and non-confocal split-detection cone photoreceptor imaging.

Authors:  Nripun Sredar; Moataz Razeen; Bartlomiej Kowalski; Joseph Carroll; Alfredo Dubra
Journal:  Biomed Opt Express       Date:  2021-01-08       Impact factor: 3.732

2.  Use of focus measure operators for characterization of flood illumination adaptive optics ophthalmoscopy image quality.

Authors:  David Alonso-Caneiro; Danuta M Sampson; Avenell L Chew; Michael J Collins; Fred K Chen
Journal:  Biomed Opt Express       Date:  2018-01-18       Impact factor: 3.732

3.  Cone Photoreceptor Cell Segmentation and Diameter Measurement on Adaptive Optics Images Using Circularly Constrained Active Contour Model.

Authors:  Jianfei Liu; HaeWon Jung; Alfredo Dubra; Johnny Tam
Journal:  Invest Ophthalmol Vis Sci       Date:  2018-09-04       Impact factor: 4.799

4.  The Reliability of Cone Density Measurements in the Presence of Rods.

Authors:  Jessica I W Morgan; Grace K Vergilio; Jessica Hsu; Alfredo Dubra; Robert F Cooper
Journal:  Transl Vis Sci Technol       Date:  2018-06-22       Impact factor: 3.283

Review 5.  Adaptive optics: principles and applications in ophthalmology.

Authors:  Engin Akyol; Ahmed M Hagag; Sobha Sivaprasad; Andrew J Lotery
Journal:  Eye (Lond)       Date:  2020-11-30       Impact factor: 3.775

6.  RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images.

Authors:  David Cunefare; Alison L Huckenpahler; Emily J Patterson; Alfredo Dubra; Joseph Carroll; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2019-07-08       Impact factor: 3.562

7.  Deep learning based detection of cone photoreceptors with multimodal adaptive optics scanning light ophthalmoscope images of achromatopsia.

Authors:  David Cunefare; Christopher S Langlo; Emily J Patterson; Sarah Blau; Alfredo Dubra; Joseph Carroll; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2018-07-18       Impact factor: 3.562

Review 8.  Photoreceptor-Based Biomarkers in AOSLO Retinal Imaging.

Authors:  Katie M Litts; Robert F Cooper; Jacque L Duncan; Joseph Carroll
Journal:  Invest Ophthalmol Vis Sci       Date:  2017-05-01       Impact factor: 4.799

9.  Automatic Cone Photoreceptor Localisation in Healthy and Stargardt Afflicted Retinas Using Deep Learning.

Authors:  Benjamin Davidson; Angelos Kalitzeos; Joseph Carroll; Alfredo Dubra; Sebastien Ourselin; Michel Michaelides; Christos Bergeles
Journal:  Sci Rep       Date:  2018-05-21       Impact factor: 4.379

10.  Interocular symmetry, intraobserver repeatability, and interobserver reliability of cone density measurements in the 13-lined ground squirrel.

Authors:  Benjamin S Sajdak; Alexander E Salmon; Rachel E Linderman; Jenna A Cava; Heather Heitkotter; Joseph Carroll
Journal:  PLoS One       Date:  2019-09-26       Impact factor: 3.240

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