| Literature DB >> 26613086 |
Rocío Prieto-Pérez1, Guillermo Solano-López2, Teresa Cabaleiro3, Manuel Román1, Dolores Ochoa1, María Talegón1, Ofelia Baniandrés4, José Luis López-Estebaranz5, Pablo de la Cueva6, Esteban Daudén2, Francisco Abad-Santos3.
Abstract
Psoriasis is a chronic skin disease in which genetics play a major role. Although many genome-wide association studies have been performed in psoriasis, knowledge of the age at onset remains limited. Therefore, we analyzed 173 single-nucleotide polymorphisms in genes associated with psoriasis and other autoimmune diseases in patients with moderate-to-severe plaque psoriasis type I (early-onset, <40 years) or type II (late-onset, ≥40 years) and healthy controls. Moreover, we performed a comparison between patients with type I psoriasis and patients with type II psoriasis. Our comparison of a stratified population with type I psoriasis (n = 155) and healthy controls (N = 197) is the first to reveal a relationship between the CLMN, FBXL19, CCL4L, C17orf51, TYK2, IL13, SLC22A4, CDKAL1, and HLA-B/MICA genes. When we compared type I psoriasis with type II psoriasis (N = 36), we found a significant association between age at onset and the genes PSORS6, TNF-α, FCGR2A, TNFR1, CD226, HLA-C, TNFAIP3, and CCHCR1. Moreover, we replicated the association between rs12191877 (HLA-C) and type I psoriasis and between type I and type II psoriasis. Our findings highlight the role of genetics in age of onset of psoriasis.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26613086 PMCID: PMC4647058 DOI: 10.1155/2015/101879
Source DB: PubMed Journal: J Immunol Res ISSN: 2314-7156 Impact factor: 4.818
SNPs associated with type I (early-onset) and type II (late-onset) psoriasis: an update.
| SNP | Gene | Function† | Association with | References | ||
|---|---|---|---|---|---|---|
| Ps type I | Ps type II | Ps type I versus type II | ||||
| — | HLA-C | X | X | [ | ||
| — | HLA-C | X | [ | |||
| rs1265181 |
| Encodes a class I molecule which plays a central role in the immune system by presenting peptides derived from endoplasmic reticulum lumen | X | X | [ | |
|
| X | X | [ | |||
| rs4406273 | X | X | [ | |||
| rs2395029 | X | [ | ||||
| rs10484554 | X | X | X | [ | ||
| rs13191099 | X | [ | ||||
| rs10876882 |
| X | [ | |||
|
| ||||||
| rs33980500 |
| Encodes a protein involved in regulating responses to cytokines by members of the Rel/NF-kappa-B transcription factor family | X | [ | ||
| rs71562288 | X | [ | ||||
|
| ||||||
| rs2233278 |
| Encodes A20-binding protein which plays a role in autoimmunity and tissue homeostasis through the regulation of nuclear factor kappa-B activation | X | [ | ||
| rs17728338 |
| X | [ | |||
|
| ||||||
| rs1295685 |
| Encodes a cytokine involved in several stages of B cell maturation and differentiation | X | [ | ||
|
| ||||||
| rs17716942 |
| Encodes an Asp-Glu-Ala-Asp box protein (putative RNA helicases) | X | [ | ||
| rs1990760 | X | [ | ||||
|
| ||||||
| rs27524 |
| Encodes an aminopeptidase involved in trimming HLA class I-binding precursors | X | [ | ||
|
| ||||||
| rs11209026 |
| Encodes a subunit of the receptor for IL23A/IL23 | X | [ | ||
| rs72676067 | X | [ | ||||
|
| ||||||
| rs10876882 |
| Encodes a subunit of IL23 involved in immune responses | X | [ | ||
|
| ||||||
| — |
| Encodes precursors of the cornified envelope of the stratum corneum | X | [ | ||
|
| ||||||
| rs2546890 |
| Encodes a subunit of IL12 that acts on T and natural killer cells | X | X | [ | |
|
| ||||||
| rs60813083 |
| Encodes a protein that may play a role in spermatogenesis | X | [ | ||
|
| ||||||
| rs887998 |
| Encodes a receptor for IL1 involved in inflammatory responses | X | [ | ||
|
| ||||||
| rs16944 |
| Encodes a cytokine produced by activated macrophages and is involved in immune responses, cell proliferation, differentiation, and apoptosis | X | [ | ||
| rs2853550 | X | [ | ||||
|
| ||||||
| rs26653 |
| Encodes an aminopeptidase involved in trimming HLA class I-binding precursors so that they can be presented on the MHC class I molecule | X | [ | ||
| rs30187 | X | [ | ||||
|
| ||||||
| rs2227473 |
| Encodes an interleukin 22 that contributes to the inflammatory response | X | [ | ||
| rs2227483 | X | [ | ||||
| INDEL rs35774195/rs10784699 | X | [ | ||||
|
| ||||||
| rs6822844 |
| Encode cytokines that are important in the innate and adaptive immune responses by inducing differentiation, proliferation, and activity of multiple target cells including macrophages, natural killer cells, B cells, and cytotoxic T cells | X | [ | ||
| rs2069778 | X | [ | ||||
|
| ||||||
| rs6311 |
| Encodes a receptor for neurotransmitter serotonin | X | [ | ||
|
| ||||||
|
|
| Encodes genetic locus associated with susceptibility to psoriasis | X |
| [ | |
|
| ||||||
| rs1800629 |
| Encodes a cytokine secreted by macrophages and involved in the regulation of cell proliferation, differentiation, and apoptosis, as well as in lipid metabolism and coagulation | X | [ | ||
|
| X |
| [ | |||
|
| ||||||
| rs3733197 |
| Encodes a protein involved in B cell receptor-induced calcium mobilization from intracellular stores | X | [ | ||
|
| ||||||
| rs755622 |
| Encodes a lymphokine involved in cell-mediated immunity, immunoregulation, and inflammation | X | X | [ | |
|
| ||||||
| rs6693899 |
| Encodes a cytokine produced by monocytes and lymphocytes and involved in immunoregulation and inflammation | X | X | [ | |
| rs1800896 | X | [ | ||||
|
| ||||||
| rs4341 |
| Encodes an enzyme involved in catalyzing the conversion of angiotensin I into a physiologically active peptide angiotensin II | X | [ | ||
|
| ||||||
| SNPs at positions -1540, -1512, -1451, -460, and -152 |
| Encodes a protein involved in angiogenesis, vasculogenesis, endothelial cell growth, promotion of cell migration, and inhibition of apoptosis | X | [ | ||
|
| ||||||
| SNPs at positions -386 and -404 |
| Encodes a protein that may be a regulator of keratinocyte proliferation or differentiation | X | [ | ||
| — | CCHCR1 | X | [ | |||
SNP: single-nucleotide polymorphism; Ps: psoriasis; †Information available at NCBI (http://www.ncbi.nlm.nih.gov/gene) or GeneCards (http://www.genecards.org/); #Study performed in pediatric-onset psoriasis (patients <18 years); Association found in our study.
Results of univariate linear regression analysis (unadjusted and adjusted for rs12191877 in HLA-C) and multivariate linear regression analysis (155 patients with type I psoriasis versus 197 controls). In the multivariate analysis, we included the SNPs with p < 0.1 in the univariate analysis adjusted for HLA-C. Only polymorphisms that were significant in the multivariate analysis are shown.
| SNP | Gene | Model | Risk genotype |
Univariate unadjusted. Type I |
Univariate adjusted for | Multivariate | |||
|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) |
| OR (95% CI) |
| OR (95% CI) |
| ||||
| rs2282276 |
| A | CC/CT | 1.74 (0.96–3.15) | 0.066 | 1.95 (1.04–3.65) | 0.037 | 3.90 (1.13–13.38) | 0.031 |
| rs10782001 |
| A | GG/AG | 1.58 (1.13–2.21) | 0.007 | 1.59 (1.09–2.32) | 0.016 | 2.10 (1.05–4.17) | 0.035 |
| rs1634517 |
| D | AA/AC | 0.89 (0.58–1.36) | 0.590 | 0.64 (0.39–1.05) | 0.073 | 0.34 (0.14–0.84) | 0.019 |
| rs1975974 |
| A | GG/AG | 0.80 (0.57–1.14) | 0.220 | 0.66 (0.44–0.99) | 0.040 | 0.48 (0.23–0.99) | 0.048 |
| rs12720356 |
| A | GG/GT | 0.42 (0.21–0.81) | 0.019 | 0.27 (0.13–0.58) | 0.0003 | 0.10 (0.03–0.39) | 0.001 |
| rs1800925 |
| R | TT | 0.18 (0.02–1.45) | 0.051 | 0.17 (0.02–1.49) | 0.061 | 0.01 (0.00–0.73) | 0.034 |
| rs3792876 |
| A | TT/CT | 1.57 (0.89–2.76) | 0.110 | 1.87 (0.98–3.55) | 0.057 | 3.75 (1.19–11.83) | 0.024 |
| rs6908425 |
| A | TT/CT | 0.67 (0.47–0.97) | 0.029 | 0.58 (0.39–0.89) | 0.01 | 0.41 (0.20–0.85) | 0.017 |
| rs12191877 |
| A | TT/CT | 5.92 (3.83–9.15) | 2.50 | — | — | 30.54 (10.62–87.85) | 0.000 |
| rs13437088 |
| D | TT/CT | 2.17 (1.42–3.34) | 3.00 | 1.93 (1.19–3.13) | 0.007 | 2.52 (1.01–6.31) | 0.048 |
CLMN: calponin-like transmembrane gene; FBXL19: F-box and leucine-rich repeat protein 19; CCL4L: chemokine (C-C motif) ligand 4-like; C17orf51: chromosome 17 open reading frame 51; TYK2: nonreceptor tyrosine-protein kinase; IL13: interleukin 13; SLC22A4: solute carrier family 22 member 4; CDKAL1: cyclin-dependent kinase 5 regulatory subunit associated protein 1-like 1; HLA: major histocompatibility complex; MICA: major histocompatibility complex class I polypeptide-related sequence A; SNPs: single-nucleotide polymorphisms; OR: odds ratio of presenting type 1 psoriasis; CI: confidence interval; A: additive; R: recessive; D: dominant; —: no data.
Results of univariate and multivariate linear regression analyses (155 patients with psoriasis type I versus 36 cases with psoriasis type II). SNPs with p < 0.1 in the univariate analysis were included in the multivariate analysis. Only polymorphisms that were significant in the multivariate analysis are shown.
| SNP | Gene | Model | Risk genotype | Univariate Ps patients type I versus type II | Multivariate | ||
|---|---|---|---|---|---|---|---|
| OR (95% CI) |
| OR (95% CI) |
| ||||
| rs1801274 |
| A | CC/CT | 1.96 (1.12–3.45) | 0.016 | 5.26 (1.11–25) | 0.037 |
| rs191190 |
| D | CC/CT | 0.43 (0.17–1.11) | 0.065 | 0.01 (1.44 | 0.018 |
| rs763361 |
| D | TT/CT | 2.08 (0.99–4.35) | 0.056 | 33.33 (1.11–1000) | 0.043 |
| rs12459358 |
| A | TT/CT | 2.44 (1.32–4.55) | 0.002 | 11.11 (1.32–100) | 0.026 |
| rs10499194 |
| D | TT/CT | 0.38 (0.17–0.90) | 0.02 | 0.01 (6.77 | 0.030 |
| rs12191877 |
| A | TT/CT | 2.33 (1.23–4.35) | 0.006 | 12.50 (1.06–100) | 0.045 |
| rs6920220 |
| A | AA/AG | 0.55 (0.30–1.03) | 0.068 | 0.05 (0.003–0.90) | 0.042 |
| rs361525 |
| C | AG | 2.17 (0.62–7.69) | 0.087 | 0.01 (5.48 | 0.024 |
| rs1576 |
| D | GG/GC | 2.56 (1.22–5.26) | 0.012 | 166.67 (2.32–1000) | 0.019 |
FCGR2A: Fc fragment of IgG low affinity IIa receptor; TNFR1: tumor necrosis factor receptor 1; CD226: CD226 antigen; PSORS6: psoriasis susceptibility 6; TNFAIP3: tumor necrosis factor alpha-induced protein 3; HLA-C: major histocompatibility complex; TNFAIP3: tumor necrosis factor alpha-induced protein 3; TNF-α: tumor necrosis factor alpha; CCHCR1: coiled-coil alpha-helical rod protein 1; SNPs: single-nucleotide polymorphisms; OR: odds ratio of presenting type I psoriasis; CI: confidence interval; A: additive; D: dominant; C: codominant.