Literature DB >> 25124732

Identification of loci associated with late-onset psoriasis using dense genotyping of immune-related regions.

H L Hébert1, J Bowes, Rh Ll Smith, E Flynn, R Parslew, A Alsharqi, N J McHugh, J N W N Barker, C E M Griffiths, A Barton, R B Warren.   

Abstract

BACKGROUND: Chronic plaque psoriasis can be subdivided into two groups according to the age of onset: type 1 (early onset, before 40 years) and type 2 (late onset, at or beyond 40 years). So far, 36 genetic loci have been associated with early-onset psoriasis in genome-wide association studies of white populations, while few studies have investigated genetic susceptibility to late-onset psoriasis.
OBJECTIVES: To characterize the genetics underpinning late-onset psoriasis.
METHODS: We genotyped 543 cases of late-onset psoriasis and 4373 healthy controls using the Immunochip array, a dense genotyping chip containing single-nucleotide polymorphisms previously associated with autoimmune diseases. Imputation using SNP2HLA and stepwise logistic regression analysis was performed for markers spanning the human leucocyte antigen gene region.
RESULTS: Two loci (HLA-C and IL12B) previously associated with early-onset psoriasis showed significant association at a genome-wide threshold in the current study (P < 5 × 10(-8)). Six more loci (TRAF3IP2, IL23R, RNF114, IFIH1, IL23A and HLA-A) showed study-wide significant association (P < 2·3 × 10(-5); calculated using Genetic type 1 error calculator). Additionally, we identified an association at IL1R1 on chromosome 2q13, which is not associated with early-onset disease.
CONCLUSIONS: This is the largest study to date of genetic loci in late-onset psoriasis, and demonstrates the overlap that exists with early-onset psoriasis. It also suggests that some loci are associated exclusively with late-onset psoriasis.
© 2014 British Association of Dermatologists.

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Year:  2015        PMID: 25124732     DOI: 10.1111/bjd.13340

Source DB:  PubMed          Journal:  Br J Dermatol        ISSN: 0007-0963            Impact factor:   9.302


  7 in total

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Review 2.  Type I interferon in rheumatic diseases.

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4.  High resolution HLA haplotyping by imputation for a British population bioresource.

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5.  The association of HLA-C and ERAP1 polymorphisms in early and late onset psoriasis and psoriatic arthritis patients of Hungary.

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6.  Polymorphisms Associated with Age at Onset in Patients with Moderate-to-Severe Plaque Psoriasis.

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Review 7.  The role of hormones in the pathogenesis of psoriasis vulgaris.

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  7 in total

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