Literature DB >> 16029332

A study of PSORS1C1 gene polymorphisms in Chinese patients with psoriasis.

Y T Chang1, H N Liu, Y M Shiao, M W Lin, D D Lee, M-T Liu, W J Wang, S Wu, C Y Lai, S F Tsai.   

Abstract

BACKGROUND: Although genetic analyses have identified the HLA-Cw*0602 allele as the major risk allele for chronic plaque psoriasis in various ethnic groups, it has been proposed that the association of Cw*0602 is due to linkage disequilibrium and that other nearby genes are involved in susceptibility to psoriasis. The psoriasis susceptibility 1 candidate 1 (PSORS1C1, formerly SEEK1) gene, located 127 kb telomeric to the HLA-C locus, is considered to be one of the potential candidate genes of psoriasis. Up to the present, no association study of the PSORS1C1 gene has been conducted on Chinese patients with psoriasis.
OBJECTIVES: We aimed to determine whether the genetic polymorphisms of the PSORS1C1 gene were associated with an increased risk of psoriasis in Chinese patients.
METHODS: We investigated the PSORS1C1 gene for disease association by direct sequencing of the PSORS1C1 gene in 143 Chinese patients with chronic plaque psoriasis and 188 control subjects. Genotyping for HLA-Cw*0602 and the alpha-helix coiled-coil rod homologue (C6orf18, formerly HCR) gene was also carried out using a sequence-based typing method.
RESULTS: We identified 10 single nucleotide polymorphisms (SNPs) on the PSORS1C1 gene in our subjects; four of these SNPs cause amino acid change. We also detected poly(C) repeat variants from nucleotide positions 386-392 (poly(C)6-8). The poly(C) repeat polymorphisms cause a frame shift mutation. Another poly(C) repeat variant was also found at nucleotide positions 748-751. No significantly different allelic distributions of the PSORS1C1 SNPs or poly(C) repeat polymorphisms could be found between the patients with chronic plaque psoriasis and controls after correction for multiple testing. However, a significant increase of the Cw*0602 allele and tryptophan-tryptophan allele of the C6orf18 gene (HCR*WW) was found in patients with early onset psoriasis (21.9% vs. 4.8%, P < 10(-7)). Haplotype-based association analysis also showed a susceptibility haplotype carrying Cw*0602 and HCR*WW alleles in early onset Chinese patients.
CONCLUSIONS: Our results indicate that the PSORS1C1 gene might not play an important role in the causation of chronic plaque psoriasis in Chinese people.

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Year:  2005        PMID: 16029332     DOI: 10.1111/j.1365-2133.2005.06570.x

Source DB:  PubMed          Journal:  Br J Dermatol        ISSN: 0007-0963            Impact factor:   9.302


  8 in total

1.  Sequence and haplotype analysis supports HLA-C as the psoriasis susceptibility 1 gene.

Authors:  Rajan P Nair; Philip E Stuart; Ioana Nistor; Ravi Hiremagalore; Nicholas V C Chia; Stefan Jenisch; Michael Weichenthal; Gonçalo R Abecasis; Henry W Lim; Enno Christophers; John J Voorhees; James T Elder
Journal:  Am J Hum Genet       Date:  2006-03-31       Impact factor: 11.025

Review 2.  [Molecular genetic basis of predisposition to psoriasis].

Authors:  E S Galimova; V L Akhmetova; E K Khusnutdinova
Journal:  Genetika       Date:  2008-05

3.  Polymorphisms in STAT-4, IL-10, PSORS1C1, PTPN2 and MIR146A genes are associated differently with prognostic factors in Italian patients affected by rheumatoid arthritis.

Authors:  C Ciccacci; P Conigliaro; C Perricone; S Rufini; P Triggianese; C Politi; G Novelli; R Perricone; P Borgiani
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4.  Detection of a rare oligo(A) repeat tract mutation (8As-->7As) in the sequence encoding the La/SS-B autoantigen.

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Journal:  Anal Biochem       Date:  2007-07-05       Impact factor: 3.365

5.  Meta-analysis of RNA sequencing datasets reveals an association between TRAJ23, psoriasis, and IL-17A.

Authors:  Alexander A Merleev; Alina I Marusina; Chelsea Ma; James T Elder; Lam C Tsoi; Siba P Raychaudhuri; Stephan Weidinger; Elizabeth A Wang; Iannis E Adamopoulos; Guillaume Luxardi; Johann E Gudjonsson; Michiko Shimoda; Emanual Maverakis
Journal:  JCI Insight       Date:  2018-07-12

6.  A multilocus genetic study in a cohort of Italian SLE patients confirms the association with STAT4 gene and describes a new association with HCP5 gene.

Authors:  Cinzia Ciccacci; Carlo Perricone; Fulvia Ceccarelli; Sara Rufini; Davide Di Fusco; Cristiano Alessandri; Francesca Romana Spinelli; Enrica Cipriano; Giuseppe Novelli; Guido Valesini; Paola Borgiani; Fabrizio Conti
Journal:  PLoS One       Date:  2014-11-04       Impact factor: 3.240

7.  Polymorphisms Associated with Age at Onset in Patients with Moderate-to-Severe Plaque Psoriasis.

Authors:  Rocío Prieto-Pérez; Guillermo Solano-López; Teresa Cabaleiro; Manuel Román; Dolores Ochoa; María Talegón; Ofelia Baniandrés; José Luis López-Estebaranz; Pablo de la Cueva; Esteban Daudén; Francisco Abad-Santos
Journal:  J Immunol Res       Date:  2015-11-03       Impact factor: 4.818

8.  HLA-C*06:02-independent, gender-related association of PSORS1C3 and PSORS1C1/CDSN single-nucleotide polymorphisms with risk and severity of psoriasis.

Authors:  Andrzej Wiśniewski; Łukasz Matusiak; Aneta Szczerkowska-Dobosz; Izabela Nowak; Piotr Kuśnierczyk
Journal:  Mol Genet Genomics       Date:  2018-03-27       Impact factor: 3.291

  8 in total

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