Literature DB >> 26603275

Blocking Deprotonation with Retention of Aromaticity in a Plant ent-Copalyl Diphosphate Synthase Leads to Product Rearrangement.

Kevin C Potter1, Jiachen Zi1, Young J Hong2, Samuel Schulte1, Brandi Malchow1, Dean J Tantillo2, Reuben J Peters3.   

Abstract

Substitution of a histidine, comprising part of the catalytic base group in the ent-copalyl diphosphate synthases found in all seed plants for gibberellin phytohormone metabolism, by a larger aromatic residue leads to rearrangements. Through a series of 1,2-hydride and methyl shifts of the initially formed bicycle predominant formation of (-)-kolavenyl diphosphate is observed. Further mutational analysis and quantum chemical calculations provide mechanistic insight into the basis for this profound effect on product outcome.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  biosynthesis; cyclizations; natural products; reaction mechanisms; rearrangements

Mesh:

Substances:

Year:  2015        PMID: 26603275      PMCID: PMC4768914          DOI: 10.1002/anie.201509060

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  19 in total

Review 1.  Two rings in them all: the labdane-related diterpenoids.

Authors:  Reuben J Peters
Journal:  Nat Prod Rep       Date:  2010-10-01       Impact factor: 13.423

2.  Probing the role of the DXDD motif in Class II diterpene cyclases.

Authors:  Sladjana Prisic; Jianjun Xu; Robert M Coates; Reuben J Peters
Journal:  Chembiochem       Date:  2007-05-25       Impact factor: 3.164

3.  Perturbing the structure of the 2-norbornyl cation through C-H...N and C-H...pi interactions.

Authors:  Young J Hong; Dean J Tantillo
Journal:  J Org Chem       Date:  2007-10-17       Impact factor: 4.354

4.  A modular approach for facile biosynthesis of labdane-related diterpenes.

Authors:  Anthony Cyr; P Ross Wilderman; Mara Determan; Reuben J Peters
Journal:  J Am Chem Soc       Date:  2007-05-05       Impact factor: 15.419

5.  Mycobacterium tuberculosis H37Rv3377c encodes the diterpene cyclase for producing the halimane skeleton.

Authors:  Chiaki Nakano; Tomoo Okamura; Tsutomu Sato; Tohru Dairi; Tsutomu Hoshino
Journal:  Chem Commun (Camb)       Date:  2005-01-04       Impact factor: 6.222

6.  Neo-clerodane diterpenes from the hallucinogenic sage Salvia divinorum.

Authors:  Osamu Shirota; Kumi Nagamatsu; Setsuko Sekita
Journal:  J Nat Prod       Date:  2006-12       Impact factor: 4.050

7.  Novel product chemistry from mechanistic analysis of ent-copalyl diphosphate synthases from plant hormone biosynthesis.

Authors:  Kevin Potter; Jared Criswell; Jiachen Zi; Alisha Stubbs; Reuben J Peters
Journal:  Angew Chem Int Ed Engl       Date:  2014-05-23       Impact factor: 15.336

8.  A single residue change leads to a hydroxylated product from the class II diterpene cyclization catalyzed by abietadiene synthase.

Authors:  Jared Criswell; Kevin Potter; Freya Shephard; Michael H Beale; Reuben J Peters
Journal:  Org Lett       Date:  2012-11-20       Impact factor: 6.005

9.  Functional analysis of eubacterial diterpene cyclases responsible for biosynthesis of a diterpene antibiotic, terpentecin.

Authors:  Yoshimitsu Hamano; Tomohisa Kuzuyama; Nobuya Itoh; Kazuo Furihata; Haruo Seto; Tohru Dairi
Journal:  J Biol Chem       Date:  2002-07-22       Impact factor: 5.157

10.  Structure and mechanism of the diterpene cyclase ent-copalyl diphosphate synthase.

Authors:  Mustafa Köksal; Huayou Hu; Robert M Coates; Reuben J Peters; David W Christianson
Journal:  Nat Chem Biol       Date:  2011-05-22       Impact factor: 15.040

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  20 in total

1.  Combinatorial biosynthesis and the basis for substrate promiscuity in class I diterpene synthases.

Authors:  Meirong Jia; Sambit K Mishra; Samuel Tufts; Robert L Jernigan; Reuben J Peters
Journal:  Metab Eng       Date:  2019-06-17       Impact factor: 9.783

2.  A conserved amino acid residue critical for product and substrate specificity in plant triterpene synthases.

Authors:  Melissa Salmon; Ramesha B Thimmappa; Robert E Minto; Rachel E Melton; Richard K Hughes; Paul E O'Maille; Andrew M Hemmings; Anne Osbourn
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-13       Impact factor: 11.205

3.  Biosynthesis of the microtubule-destabilizing diterpene pseudolaric acid B from golden larch involves an unusual diterpene synthase.

Authors:  Sibongile Mafu; Prema Sambandaswami Karunanithi; Teresa Ann Palazzo; Bronwyn Lee Harrod; Selina Marakana Rodriguez; Iris Natalie Mollhoff; Terrence Edward O'Brien; Shen Tong; Oliver Fiehn; Dean J Tantillo; Jörg Bohlmann; Philipp Zerbe
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

Review 4.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

5.  Conserved bases for the initial cyclase in gibberellin biosynthesis: from bacteria to plants.

Authors:  Cody Lemke; Kevin C Potter; Samuel Schulte; Reuben J Peters
Journal:  Biochem J       Date:  2019-09-24       Impact factor: 3.857

6.  cis or trans with class II diterpene cyclases.

Authors:  Meirong Jia; Reuben J Peters
Journal:  Org Biomol Chem       Date:  2017-04-11       Impact factor: 3.876

7.  Crystal Structure and Mechanistic Molecular Modeling Studies of Mycobacterium tuberculosis Diterpene Cyclase Rv3377c.

Authors:  Yue Zhang; Lisa M Prach; Terrence E O'Brien; Frank DiMaio; Daniil M Prigozhin; Jacob E Corn; Tom Alber; Justin B Siegel; Dean J Tantillo
Journal:  Biochemistry       Date:  2020-11-12       Impact factor: 3.162

8.  Catalytic Bases and Stereocontrol in Lamiaceae Class II Diterpene Cyclases.

Authors:  Samuel Schulte; Kevin C Potter; Cody Lemke; Reuben J Peters
Journal:  Biochemistry       Date:  2018-05-31       Impact factor: 3.162

9.  Extreme promiscuity of a bacterial and a plant diterpene synthase enables combinatorial biosynthesis.

Authors:  Meirong Jia; Kevin C Potter; Reuben J Peters
Journal:  Metab Eng       Date:  2016-04-07       Impact factor: 9.783

10.  Functional Diversity of Diterpene Synthases in the Biofuel Crop Switchgrass.

Authors:  Kyle A Pelot; Ruibing Chen; David M Hagelthorn; Cari A Young; J Bennett Addison; Andrew Muchlinski; Dorothea Tholl; Philipp Zerbe
Journal:  Plant Physiol       Date:  2018-07-15       Impact factor: 8.340

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