Literature DB >> 26568113

Substrate structure-activity relationships guide rational engineering of modular polyketide synthase ketoreductases.

Constance B Bailey1, Marjolein E Pasman1, Adrian T Keatinge-Clay2.   

Abstract

Modular polyketide synthase ketoreductases can set two chiral centers through a single reduction. To probe the basis of stereocontrol, a structure-activity relationship study was performed with three α-methyl, β-ketothioester substrates and four ketoreductases. Since interactions with the β-ketoacyl moiety were found to be most critical, residues implicated in contacting this moiety were mutated. Two mutations were sufficient to completely reverse the stereoselectivity of the model ketoreductase EryKR1, converting it from an enzyme that generates (2S,3R)-products into one that yields (2S,3S)-products.

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Year:  2016        PMID: 26568113      PMCID: PMC4690787          DOI: 10.1039/c5cc07315d

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  24 in total

1.  High-throughput mutagenesis to evaluate models of stereochemical control in ketoreductase domains from the erythromycin polyketide synthase.

Authors:  Helen M O'Hare; Abel Baerga-Ortiz; Bojana Popovic; Jonathan B Spencer; Peter F Leadlay
Journal:  Chem Biol       Date:  2006-03

2.  The thioesterase domain from the pimaricin and erythromycin biosynthetic pathways can catalyze hydrolysis of simple thioester substrates.

Authors:  Krishna K Sharma; Christopher N Boddy
Journal:  Bioorg Med Chem Lett       Date:  2007-03-23       Impact factor: 2.823

3.  Substrate-dependent stereospecificity of Tyl-KR1: an isolated polyketide synthase ketoreductase domain from Streptomyces fradiae.

Authors:  Matthias Häckh; Michael Müller; Steffen Lüdeke
Journal:  Chemistry       Date:  2013-05-16       Impact factor: 5.236

4.  Structural and functional studies of a trans-acyltransferase polyketide assembly line enzyme that catalyzes stereoselective α- and β-ketoreduction.

Authors:  Shawn K Piasecki; Jianting Zheng; Abram J Axelrod; Madeline E Detelich; Adrian T Keatinge-Clay
Journal:  Proteins       Date:  2014-04-16

5.  The structure of a ketoreductase determines the organization of the beta-carbon processing enzymes of modular polyketide synthases.

Authors:  Adrian T Keatinge-Clay; Robert M Stroud
Journal:  Structure       Date:  2006-03-23       Impact factor: 5.006

6.  Molecular basis of Celmer's rules: stereochemistry of catalysis by isolated ketoreductase domains from modular polyketide synthases.

Authors:  Alexandros P Siskos; Abel Baerga-Ortiz; Shilpa Bali; Viktor Stein; Hassan Mamdani; Dieter Spiteller; Bojana Popovic; Jonathan B Spencer; James Staunton; Kira J Weissman; Peter F Leadlay
Journal:  Chem Biol       Date:  2005-10

Review 7.  Modern aldol methods for the total synthesis of polyketides.

Authors:  Bernd Schetter; Rainer Mahrwald
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-20       Impact factor: 15.336

8.  Stereochemistry of catalysis by the ketoreductase activity in the first extension module of the erythromycin polyketide synthase.

Authors:  Lars H Østergaard; Laurenz Kellenberger; Jesús Cortés; Marc P Roddis; Matthew Deacon; James Staunton; Peter F Leadlay
Journal:  Biochemistry       Date:  2002-02-26       Impact factor: 3.162

9.  Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase PhaB from Ralstonia eutropha.

Authors:  Jieun Kim; Jeong Ho Chang; Eun-Jung Kim; Kyung-Jin Kim
Journal:  Biochem Biophys Res Commun       Date:  2013-11-06       Impact factor: 3.575

10.  Preparative, in vitro biocatalysis of triketide lactone chiral building blocks.

Authors:  Andrew D Harper; Constance B Bailey; Angela D Edwards; Joshua F Detelich; Adrian T Keatinge-Clay
Journal:  Chembiochem       Date:  2012-09-05       Impact factor: 3.164

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  14 in total

1.  Mechanism and Stereochemistry of Polyketide Chain Elongation and Methyl Group Epimerization in Polyether Biosynthesis.

Authors:  Xinqiang Xie; Ashish Garg; Chaitan Khosla; David E Cane
Journal:  J Am Chem Soc       Date:  2017-02-14       Impact factor: 15.419

Review 2.  Insights into polyketide biosynthesis gained from repurposing antibiotic-producing polyketide synthases to produce fuels and chemicals.

Authors:  Satoshi Yuzawa; Jay D Keasling; Leonard Katz
Journal:  J Antibiot (Tokyo)       Date:  2016-06-01       Impact factor: 2.649

3.  Structural and Functional Trends in Dehydrating Bimodules from trans-Acyltransferase Polyketide Synthases.

Authors:  Drew T Wagner; Jia Zeng; Constance B Bailey; Darren C Gay; Fang Yuan; Hannah R Manion; Adrian T Keatinge-Clay
Journal:  Structure       Date:  2017-06-15       Impact factor: 5.006

Review 4.  Engineering modular polyketide synthases for production of biofuels and industrial chemicals.

Authors:  Wenlong Cai; Wenjun Zhang
Journal:  Curr Opin Biotechnol       Date:  2017-09-22       Impact factor: 9.740

5.  Epimerase and Reductase Activities of Polyketide Synthase Ketoreductase Domains Utilize the Same Conserved Tyrosine and Serine Residues.

Authors:  Xinqiang Xie; Ashish Garg; Adrian T Keatinge-Clay; Chaitan Khosla; David E Cane
Journal:  Biochemistry       Date:  2016-02-12       Impact factor: 3.162

6.  General chemoenzymatic route to two-stereocenter triketides employing assembly line ketoreductases.

Authors:  Zhicheng Zhang; Alexis J Cepeda; Mireya L Robles; Melissa Hirsch; Kaan Kumru; Jina A Zhou; Adrian T Keatinge-Clay
Journal:  Chem Commun (Camb)       Date:  2019-12-17       Impact factor: 6.222

7.  Methyltransferases excised from trans-AT polyketide synthases operate on N-acetylcysteamine-bound substrates.

Authors:  D Cole Stevens; Drew T Wagner; Hannah R Manion; Bradley K Alexander; Adrian T Keatinge-Clay
Journal:  J Antibiot (Tokyo)       Date:  2016-06-15       Impact factor: 2.649

Review 8.  Engineered polyketides: Synergy between protein and host level engineering.

Authors:  Jesus F Barajas; Jacquelyn M Blake-Hedges; Constance B Bailey; Samuel Curran; Jay D Keasling
Journal:  Synth Syst Biotechnol       Date:  2017-09-07

9.  Molecular Genetic Characterization of an Anthrabenzoxocinones Gene Cluster in Streptomyces Sp. FJS31-2 for the Biosynthesis of BE-24566B and Zunyimycin Ale.

Authors:  Yuhong Lü; Changwu Yue; Meiyun Shao; Shengyan Qian; Ning Liu; Yuxin Bao; Miao Wang; Minghao Liu; Xiaoqian Li; Yinyin Wang; Ying Huang
Journal:  Molecules       Date:  2016-05-30       Impact factor: 4.411

Review 10.  Towards Precision Engineering of Canonical Polyketide Synthase Domains: Recent Advances and Future Prospects.

Authors:  Carmen L Bayly; Vikramaditya G Yadav
Journal:  Molecules       Date:  2017-02-05       Impact factor: 4.411

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