Literature DB >> 27245558

Insights into polyketide biosynthesis gained from repurposing antibiotic-producing polyketide synthases to produce fuels and chemicals.

Satoshi Yuzawa1, Jay D Keasling1,2,3,4,5,6, Leonard Katz1,4.   

Abstract

Complex polyketides comprise a large number of natural products that have broad application in medicine and agriculture. They are produced in bacteria and fungi from enzyme complexes named type I polyketide synthases (PKSs) that are composed of multifunctional polypeptides containing discrete enzymatic domains organized into modules. The modular nature of PKSs has enabled a multitude of efforts to engineer the PKS genes to produce novel polyketides with enhanced or new properties. We have repurposed PKSs, employing up to three modules to produce a number of short-chain molecules that could have applications as fuels or industrial chemicals. Examining the enzymatic functions in vitro of these repurposed PKSs, we have uncovered a number of expanded substrate specificities and requirements of various PKS domains not previously reported and determined an unexpected difference in the order of enzymatic reactions within a module. In addition, we were able to efficiently change the stereochemistry of side chains in selected PKS products.

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Year:  2016        PMID: 27245558     DOI: 10.1038/ja.2016.64

Source DB:  PubMed          Journal:  J Antibiot (Tokyo)        ISSN: 0021-8820            Impact factor:   2.649


  28 in total

1.  Quantitative analysis of loading and extender acyltransferases of modular polyketide synthases.

Authors:  Grace F Liou; Janice Lau; David E Cane; Chaitan Khosla
Journal:  Biochemistry       Date:  2003-01-14       Impact factor: 3.162

2.  Biosynthetic gene cluster for the polyenoyltetramic acid alpha-lipomycin.

Authors:  C Bihlmaier; E Welle; C Hofmann; K Welzel; A Vente; E Breitling; M Müller; S Glaser; A Bechthold
Journal:  Antimicrob Agents Chemother       Date:  2006-06       Impact factor: 5.191

3.  A polylinker approach to reductive loop swaps in modular polyketide synthases.

Authors:  Laurenz Kellenberger; Ian S Galloway; Guido Sauter; Günter Böhm; Ulf Hanefeld; Jesús Cortés; James Staunton; Peter F Leadlay
Journal:  Chembiochem       Date:  2008-11-03       Impact factor: 3.164

4.  Broad substrate specificity of the loading didomain of the lipomycin polyketide synthase.

Authors:  Satoshi Yuzawa; Clara H Eng; Leonard Katz; Jay D Keasling
Journal:  Biochemistry       Date:  2013-05-23       Impact factor: 3.162

5.  Enzyme analysis of the polyketide synthase leads to the discovery of a novel analog of the antibiotic α-lipomycin.

Authors:  Satoshi Yuzawa; Clara H Eng; Leonard Katz; Jay D Keasling
Journal:  J Antibiot (Tokyo)       Date:  2013-10-30       Impact factor: 2.649

Review 6.  Beyond ethylmalonyl-CoA: the functional role of crotonyl-CoA carboxylase/reductase homologs in expanding polyketide diversity.

Authors:  Micheal C Wilson; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2011-11-29       Impact factor: 13.423

7.  Alteration of Polyketide Stereochemistry from anti to syn by a Ketoreductase Domain Exchange in a Type I Modular Polyketide Synthase Subunit.

Authors:  Clara H Eng; Satoshi Yuzawa; George Wang; Edward E K Baidoo; Leonard Katz; Jay D Keasling
Journal:  Biochemistry       Date:  2016-03-15       Impact factor: 3.162

8.  In vitro reconstitution and analysis of the 6-deoxyerythronolide B synthase.

Authors:  Brian Lowry; Thomas Robbins; Chih-Hisang Weng; Robert V O'Brien; David E Cane; Chaitan Khosla
Journal:  J Am Chem Soc       Date:  2013-11-01       Impact factor: 15.419

9.  Site-specific observation of acyl intermediate processing in thiotemplate biosynthesis by fourier transform mass spectrometry: the polyketide module of yersiniabactin synthetase.

Authors:  Matthew T Mazur; Christopher T Walsh; Neil L Kelleher
Journal:  Biochemistry       Date:  2003-11-25       Impact factor: 3.162

10.  Structural rearrangements of a polyketide synthase module during its catalytic cycle.

Authors:  Jonathan R Whicher; Somnath Dutta; Douglas A Hansen; Wendi A Hale; Joseph A Chemler; Annie M Dosey; Alison R H Narayan; Kristina Håkansson; David H Sherman; Janet L Smith; Georgios Skiniotis
Journal:  Nature       Date:  2014-06-18       Impact factor: 49.962

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  5 in total

Review 1.  Bio-based production of fuels and industrial chemicals by repurposing antibiotic-producing type I modular polyketide synthases: opportunities and challenges.

Authors:  Satoshi Yuzawa; Jay D Keasling; Leonard Katz
Journal:  J Antibiot (Tokyo)       Date:  2016-11-16       Impact factor: 2.649

Review 2.  Evolution and Ecology of Actinobacteria and Their Bioenergy Applications.

Authors:  Gina R Lewin; Camila Carlos; Marc G Chevrette; Heidi A Horn; Bradon R McDonald; Robert J Stankey; Brian G Fox; Cameron R Currie
Journal:  Annu Rev Microbiol       Date:  2016-09-08       Impact factor: 15.500

Review 3.  Towards Precision Engineering of Canonical Polyketide Synthase Domains: Recent Advances and Future Prospects.

Authors:  Carmen L Bayly; Vikramaditya G Yadav
Journal:  Molecules       Date:  2017-02-05       Impact factor: 4.411

4.  Genomic and transcriptomic analyses reveal differential regulation of diverse terpenoid and polyketides secondary metabolites in Hericium erinaceus.

Authors:  Juan Chen; Xu Zeng; Yan Long Yang; Yong Mei Xing; Qi Zhang; Jia Mei Li; Ke Ma; Hong Wei Liu; Shun Xing Guo
Journal:  Sci Rep       Date:  2017-08-31       Impact factor: 4.379

5.  Fecal Microbiota Taxonomic Shifts in Chinese Multiple Myeloma Patients Analyzed by Quantitative Polimerase Chain Reaction (QPCR) and 16S rRNA High-Throughput Sequencing.

Authors:  Bingqing Zhang; Jingli Gu; Junru Liu; Beihui Huang; Juan Li
Journal:  Med Sci Monit       Date:  2019-11-03
  5 in total

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