Literature DB >> 11851419

Stereochemistry of catalysis by the ketoreductase activity in the first extension module of the erythromycin polyketide synthase.

Lars H Østergaard1, Laurenz Kellenberger, Jesús Cortés, Marc P Roddis, Matthew Deacon, James Staunton, Peter F Leadlay.   

Abstract

Multiple ketoreductase activities play a crucial role in establishing the stereochemistry of the products of modular polyketide synthases (PKSs), but there has been little systematic scrutiny of catalysis by individual ketoreductases. To allow this, a diketide synthase, consisting of the loading module, first extension module, and the chain-terminating thioesterase of the erythromycin-producing PKS of Saccharopolyspora erythraea, has been expressed and purified. The DNA encoding the ketoreductase-1 domain in this construct is flanked by unique restriction sites so that another ketoreductase domain can be readily substituted. The purified recombinant diketide synthase catalyzes, at a very low rate (k(cat) equals 2.5 x 10(-3) s(-1)), the specific production of the diketide (2S,3R)-2-methyl-3-hydroxypentanoic acid. The activity of the ketoreductase domain in this model synthase was analyzed using as a model substrate (+/-)-2-methyl-3-oxopentanoic acid N-acetylcysteaminyl (NAC) ester for which k(cat)/K(m) was 21.7 M(-1) s(-1). The NAC thioester of (2S,3R)-2-methyl-3-hydroxypentanoic acid was the major product and was strongly preferred over other stereoisomers as a substrate in the reverse reaction. The bicyclic ketone (9RS)-trans-1-decalone, a known substrate for ketoreductase in fatty acid synthase, was found also to be an effective substrate for the ketoreductase of the diketide synthase. Only the (9R)-trans-1-decalone was reduced, selectively and reversibly, to the (1S,9R)-trans-decalol. The stereochemical course of reduction and oxidation is exactly as found previously for the ketoreductase of animal fatty acid synthase, an additional indication of the close similarity of these enzymes.

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Year:  2002        PMID: 11851419     DOI: 10.1021/bi0117605

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  18 in total

Review 1.  Programming of erythromycin biosynthesis by a modular polyketide synthase.

Authors:  David E Cane
Journal:  J Biol Chem       Date:  2010-06-03       Impact factor: 5.157

2.  Structural and biochemical analyses of regio- and stereospecificities observed in a type II polyketide ketoreductase.

Authors:  Pouya Javidpour; Tyler Paz Korman; Gaurav Shakya; Shiou-Chuan Tsai
Journal:  Biochemistry       Date:  2011-05-04       Impact factor: 3.162

3.  Structural and biochemical studies of the hedamycin type II polyketide ketoreductase (HedKR): molecular basis of stereo- and regiospecificities.

Authors:  Pouya Javidpour; Abhirup Das; Chaitan Khosla; Shiou-Chuan Tsai
Journal:  Biochemistry       Date:  2011-08-08       Impact factor: 3.162

4.  Inhibition kinetics and emodin cocrystal structure of a type II polyketide ketoreductase.

Authors:  Tyler Paz Korman; Yu-Hong Tan; Justin Wong; Ray Luo; Shiou-Chuan Tsai
Journal:  Biochemistry       Date:  2008-01-19       Impact factor: 3.162

5.  The biochemical basis for stereochemical control in polyketide biosynthesis.

Authors:  Chiara R Valenzano; Rachel J Lawson; Alice Y Chen; Chaitan Khosla; David E Cane
Journal:  J Am Chem Soc       Date:  2009-12-30       Impact factor: 15.419

6.  Stereospecificity of ketoreductase domains of the 6-deoxyerythronolide B synthase.

Authors:  Roselyne Castonguay; Weiguo He; Alice Y Chen; Chaitan Khosla; David E Cane
Journal:  J Am Chem Soc       Date:  2007-10-06       Impact factor: 15.419

7.  Structural enzymology of polyketide synthases.

Authors:  Shiou-Chuan Sheryl Tsai; Brian Douglas Ames
Journal:  Methods Enzymol       Date:  2009       Impact factor: 1.600

8.  Substrate structure-activity relationships guide rational engineering of modular polyketide synthase ketoreductases.

Authors:  Constance B Bailey; Marjolein E Pasman; Adrian T Keatinge-Clay
Journal:  Chem Commun (Camb)       Date:  2016-01-14       Impact factor: 6.222

9.  The determinants of activity and specificity in actinorhodin type II polyketide ketoreductase.

Authors:  Pouya Javidpour; Joel Bruegger; Supawadee Srithahan; Tyler P Korman; Matthew P Crump; John Crosby; Michael D Burkart; Shiou-Chuan Tsai
Journal:  Chem Biol       Date:  2013-09-12

10.  Antibody Probes of Module 1 of the 6-Deoxyerythronolide B Synthase Reveal an Extended Conformation During Ketoreduction.

Authors:  Dillon P Cogan; Xiuyuan Li; Natalia Sevillano; Irimpan I Mathews; Tsutomu Matsui; Charles S Craik; Chaitan Khosla
Journal:  J Am Chem Soc       Date:  2020-08-18       Impact factor: 15.419

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