Literature DB >> 26479317

A high-throughput platform for real-time analysis of membrane fission reactions reveals dynamin function.

Srishti Dar1, Sukrut C Kamerkar1, Thomas J Pucadyil1.   

Abstract

Dynamin, the paradigmatic membrane fission catalyst, assembles as helical scaffolds that hydrolyse GTP to sever the tubular necks of clathrin-coated pits. Using a facile assay system of supported membrane tubes (SMrT) engineered to mimic the dimensions of necks of clathrin-coated pits, we monitor the dynamics of a dynamin-catalysed tube-severing reaction in real time using fluorescence microscopy. We find that GTP hydrolysis by an intact helical scaffold causes progressive constriction of the underlying membrane tube. On reaching a critical dimension of 7.3 nm in radius, the tube undergoes scission and concomitant splitting of the scaffold. In a constant GTP turnover scenario, scaffold assembly and GTP hydrolysis-induced tube constriction are kinetically inseparable events leading to tube-severing reactions occurring at timescales similar to the characteristic fission times seen in vivo. We anticipate SMrT templates to allow dynamic fluorescence-based detection of conformational changes occurring in self-assembling proteins that remodel membranes.

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Year:  2015        PMID: 26479317     DOI: 10.1038/ncb3254

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  37 in total

Review 1.  Dynamin: functional design of a membrane fission catalyst.

Authors:  Sandra L Schmid; Vadim A Frolov
Journal:  Annu Rev Cell Dev Biol       Date:  2011-05-18       Impact factor: 13.827

2.  Coarse-grained simulation of dynamin-mediated fission.

Authors:  Marc Fuhrmans; Marcus Müller
Journal:  Soft Matter       Date:  2015-02-28       Impact factor: 3.679

Review 3.  Structural insights into dynamin-mediated membrane fission.

Authors:  Katja Faelber; Martin Held; Song Gao; York Posor; Volker Haucke; Frank Noé; Oliver Daumke
Journal:  Structure       Date:  2012-10-10       Impact factor: 5.006

4.  Importance of the pleckstrin homology domain of dynamin in clathrin-mediated endocytosis.

Authors:  Y Vallis; P Wigge; B Marks; P R Evans; H T McMahon
Journal:  Curr Biol       Date:  1999-03-11       Impact factor: 10.834

5.  Three-dimensional reconstruction of dynamin in the constricted state.

Authors:  P Zhang; J E Hinshaw
Journal:  Nat Cell Biol       Date:  2001-10       Impact factor: 28.824

6.  Geometric catalysis of membrane fission driven by flexible dynamin rings.

Authors:  Anna V Shnyrova; Pavel V Bashkirov; Sergey A Akimov; Thomas J Pucadyil; Joshua Zimmerberg; Sandra L Schmid; Vadim A Frolov
Journal:  Science       Date:  2013-03-22       Impact factor: 47.728

7.  Analyzing membrane remodeling and fission using supported bilayers with excess membrane reservoir.

Authors:  Sylvia Neumann; Thomas J Pucadyil; Sandra L Schmid
Journal:  Nat Protoc       Date:  2013-01-03       Impact factor: 13.491

8.  A dynamin mutant defines a superconstricted prefission state.

Authors:  Anna C Sundborger; Shunming Fang; Jürgen A Heymann; Pampa Ray; Joshua S Chappie; Jenny E Hinshaw
Journal:  Cell Rep       Date:  2014-07-31       Impact factor: 9.423

9.  Reduction of artifacts in fluorescence correlation spectroscopy due to sample adsorption on optical glass surfaces.

Authors:  Daniel K Turner; Ashley E Wayman; Chelsey N Rolando; Prasad Dande; Phillip W Carter; Edward E Remsen
Journal:  Appl Spectrosc       Date:  2013-06       Impact factor: 2.388

10.  A high precision survey of the molecular dynamics of mammalian clathrin-mediated endocytosis.

Authors:  Marcus J Taylor; David Perrais; Christien J Merrifield
Journal:  PLoS Biol       Date:  2011-03-22       Impact factor: 8.029

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  20 in total

Review 1.  Function and regulation of the divisome for mitochondrial fission.

Authors:  Felix Kraus; Krishnendu Roy; Thomas J Pucadyil; Michael T Ryan
Journal:  Nature       Date:  2021-02-03       Impact factor: 49.962

Review 2.  A novel fluorescence microscopic approach to quantitatively analyse protein-induced membrane remodelling.

Authors:  Thomas J Pucadyil
Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

Review 3.  The structural biology of the dynamin-related proteins: New insights into a diverse, multitalented family.

Authors:  Marijn G J Ford; Joshua S Chappie
Journal:  Traffic       Date:  2019-08-26       Impact factor: 6.215

4.  Membrane Tension Inhibits Rapid and Slow Endocytosis in Secretory Cells.

Authors:  Xin-Sheng Wu; Sharon Elias; Huisheng Liu; Johanna Heureaux; Peter J Wen; Allen P Liu; Michael M Kozlov; Ling-Gang Wu
Journal:  Biophys J       Date:  2017-12-05       Impact factor: 4.033

5.  Metal-Binding Propensity in the Mitochondrial Dynamin-Related Protein 1.

Authors:  Krishnendu Roy; Thomas J Pucadyil
Journal:  J Membr Biol       Date:  2022-02-26       Impact factor: 1.843

6.  Metabolic and immune-sensitive contacts between lipid droplets and endoplasmic reticulum reconstituted in vitro.

Authors:  Sukrut Kamerkar; Jagjeet Singh; Subham Tripathy; Hemangi Bhonsle; Mukesh Kumar; Roop Mallik
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-08       Impact factor: 12.779

7.  A simple supported tubulated bilayer system for evaluating protein-mediated membrane remodeling.

Authors:  Noah A Schenk; Peter J Dahl; Michael G Hanna; Anjon Audhya; Gregory G Tall; Jefferson D Knight; Arun Anantharam
Journal:  Chem Phys Lipids       Date:  2018-07-22       Impact factor: 3.329

8.  Use of the supported membrane tube assay system for real-time analysis of membrane fission reactions.

Authors:  Srishti Dar; Sukrut C Kamerkar; Thomas J Pucadyil
Journal:  Nat Protoc       Date:  2017-01-26       Impact factor: 13.491

9.  Flexible pivoting of dynamin pleckstrin homology domain catalyzes fission: insights into molecular degrees of freedom.

Authors:  Krishnakanth Baratam; Kirtika Jha; Anand Srivastava
Journal:  Mol Biol Cell       Date:  2021-05-12       Impact factor: 4.138

10.  Thomas Pucadyil: Piecing together membrane fission.

Authors:  Thomas Pucadyil; Caitlin Sedwick
Journal:  J Cell Biol       Date:  2015-11-23       Impact factor: 10.539

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