Literature DB >> 25523542

Coarse-grained simulation of dynamin-mediated fission.

Marc Fuhrmans1, Marcus Müller.   

Abstract

Fission is a process in which a region of a lipid bilayer is deformed and separated from its host membrane, so that an additional, topologically independent compartment surrounded by a continuous lipid bilayer is formed. It is a fundamental process in the organization of the compartmentalization of living organisms and carefully regulated by a number of membrane-shaping proteins. An important group within these is the dynamin family of proteins that are involved in the final severance of the hourglass-shaped neck, via which the growing compartment remains connected to the main volume until the completion of fission. We present computer simulations testing different hypotheses of how dynamin proteins facilitate fission by constriction and curvature. Our results on constraint-induced fission of cylindrical membrane tubes emphasize the importance of the local creation of positive curvature and reveal a complex picture of fission, in which the topological transformation can become arrested in an intermediate stage if the proteins constituting the fission machinery are not adaptive.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25523542     DOI: 10.1039/c4sm02533d

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  11 in total

1.  Entropic forces drive clustering and spatial localization of influenza A M2 during viral budding.

Authors:  Jesper J Madsen; John M A Grime; Jeremy S Rossman; Gregory A Voth
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-27       Impact factor: 11.205

2.  Polymer-like Model to Study the Dynamics of Dynamin Filaments on Deformable Membrane Tubes.

Authors:  Jeffrey K Noel; Frank Noé; Oliver Daumke; Alexander S Mikhailov
Journal:  Biophys J       Date:  2019-10-09       Impact factor: 4.033

3.  A Review of Mechanics-Based Mesoscopic Membrane Remodeling Methods: Capturing Both the Physics and the Chemical Diversity.

Authors:  Gaurav Kumar; Satya Chaithanya Duggisetty; Anand Srivastava
Journal:  J Membr Biol       Date:  2022-10-05       Impact factor: 2.426

Review 4.  Organizing membrane-curving proteins: the emerging dynamical picture.

Authors:  Mijo Simunovic; Patricia Bassereau; Gregory A Voth
Journal:  Curr Opin Struct Biol       Date:  2018-03-30       Impact factor: 6.809

5.  A high-throughput platform for real-time analysis of membrane fission reactions reveals dynamin function.

Authors:  Srishti Dar; Sukrut C Kamerkar; Thomas J Pucadyil
Journal:  Nat Cell Biol       Date:  2015-10-19       Impact factor: 28.824

6.  Flexible pivoting of dynamin pleckstrin homology domain catalyzes fission: insights into molecular degrees of freedom.

Authors:  Krishnakanth Baratam; Kirtika Jha; Anand Srivastava
Journal:  Mol Biol Cell       Date:  2021-05-12       Impact factor: 4.138

7.  A hemi-fission intermediate links two mechanistically distinct stages of membrane fission.

Authors:  Juha-Pekka Mattila; Anna V Shnyrova; Anna C Sundborger; Eva Rodriguez Hortelano; Marc Fuhrmans; Sylvia Neumann; Marcus Müller; Jenny E Hinshaw; Sandra L Schmid; Vadim A Frolov
Journal:  Nature       Date:  2015-06-29       Impact factor: 49.962

8.  The pleckstrin-homology domain of dynamin is dispensable for membrane constriction and fission.

Authors:  Srishti Dar; Thomas J Pucadyil
Journal:  Mol Biol Cell       Date:  2016-11-09       Impact factor: 4.138

9.  ATP-dependent membrane remodeling links EHD1 functions to endocytic recycling.

Authors:  Raunaq Deo; Manish S Kushwah; Sukrut C Kamerkar; Nagesh Y Kadam; Srishti Dar; Kavita Babu; Anand Srivastava; Thomas J Pucadyil
Journal:  Nat Commun       Date:  2018-12-05       Impact factor: 14.919

10.  The role of scaffold reshaping and disassembly in dynamin driven membrane fission.

Authors:  Martina Pannuzzo; Zachary A McDargh; Markus Deserno
Journal:  Elife       Date:  2018-12-18       Impact factor: 8.140

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.