Literature DB >> 28125102

Use of the supported membrane tube assay system for real-time analysis of membrane fission reactions.

Srishti Dar1, Sukrut C Kamerkar1, Thomas J Pucadyil1.   

Abstract

The process of membrane fission is fundamental to diverse cellular processes such as nutrient uptake, synaptic transmission and organelle biogenesis, and it involves the localized application of curvature stress to a tubular membrane intermediate, forcing it to undergo scission. Alternative techniques for creating such substrates necessitate the use of micromanipulators or sophisticated optical traps and require a high level of technical expertise. We present a facile method to generate an array of membrane tubes supported on a passivated glass coverslip, which we refer to as supported membrane tubes (SMrTs). SMrT templates are formed upon hydration of a dry lipid mix in physiological buffer and subsequent flow-induced extrusion of the lipid reservoir into long membrane tubes with variable dimensions. Following surface passivation of coverslips, these templates can be formed from a variety of lipids, with as little as 1-2 nmol of lipid in a matter of 2 h, and can be used in membrane-curvature-sensitive fission assays.

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Year:  2017        PMID: 28125102     DOI: 10.1038/nprot.2016.173

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  32 in total

1.  Membrane tube formation from giant vesicles by dynamic association of motor proteins.

Authors:  Gerbrand Koster; Martijn VanDuijn; Bas Hofs; Marileen Dogterom
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-08       Impact factor: 11.205

2.  Shape bistability of a membrane neck: a toggle switch to control vesicle content release.

Authors:  Vadim A Frolov; Vladimir A Lizunov; Antonina Ya Dunina-Barkovskaya; Andrey V Samsonov; Joshua Zimmerberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-11       Impact factor: 11.205

3.  Cooperative extraction of membrane nanotubes by molecular motors.

Authors:  Cécile Leduc; Otger Campàs; Konstantin B Zeldovich; Aurélien Roux; Pascale Jolimaitre; Line Bourel-Bonnet; Bruno Goud; Jean-François Joanny; Patricia Bassereau; Jacques Prost
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-29       Impact factor: 11.205

4.  GTP-dependent twisting of dynamin implicates constriction and tension in membrane fission.

Authors:  Aurélien Roux; Katherine Uyhazi; Adam Frost; Pietro De Camilli
Journal:  Nature       Date:  2006-04-30       Impact factor: 49.962

Review 5.  Dynamin: functional design of a membrane fission catalyst.

Authors:  Sandra L Schmid; Vadim A Frolov
Journal:  Annu Rev Cell Dev Biol       Date:  2011-05-18       Impact factor: 13.827

6.  Phosphatidylinositol 4,5-bisphosphate stimulates vesicle formation from liposomes by brain cytosol.

Authors:  Masahiro Kinuta; Hiroshi Yamada; Tadashi Abe; Masami Watanabe; Shun-Ai Li; Akihiro Kamitani; Tatsuji Yasuda; Takashi Matsukawa; Hiromi Kumon; Kohji Takei
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-26       Impact factor: 11.205

Review 7.  Thermodynamics and mechanics of membrane curvature generation and sensing by proteins and lipids.

Authors:  Tobias Baumgart; Benjamin R Capraro; Chen Zhu; Sovan L Das
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

8.  Geometric catalysis of membrane fission driven by flexible dynamin rings.

Authors:  Anna V Shnyrova; Pavel V Bashkirov; Sergey A Akimov; Thomas J Pucadyil; Joshua Zimmerberg; Sandra L Schmid; Vadim A Frolov
Journal:  Science       Date:  2013-03-22       Impact factor: 47.728

9.  Analyzing membrane remodeling and fission using supported bilayers with excess membrane reservoir.

Authors:  Sylvia Neumann; Thomas J Pucadyil; Sandra L Schmid
Journal:  Nat Protoc       Date:  2013-01-03       Impact factor: 13.491

10.  Membrane fission is promoted by insertion of amphipathic helices and is restricted by crescent BAR domains.

Authors:  Emmanuel Boucrot; Adi Pick; Gamze Çamdere; Nicole Liska; Emma Evergren; Harvey T McMahon; Michael M Kozlov
Journal:  Cell       Date:  2012-03-30       Impact factor: 41.582

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  12 in total

Review 1.  Function and regulation of the divisome for mitochondrial fission.

Authors:  Felix Kraus; Krishnendu Roy; Thomas J Pucadyil; Michael T Ryan
Journal:  Nature       Date:  2021-02-03       Impact factor: 49.962

2.  Topography design in model membranes: Where biology meets physics.

Authors:  Sarina Chand; Paul Beales; Frederik Claeyssens; Barbara Ciani
Journal:  Exp Biol Med (Maywood)       Date:  2018-10-31

Review 3.  A novel fluorescence microscopic approach to quantitatively analyse protein-induced membrane remodelling.

Authors:  Thomas J Pucadyil
Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

4.  Metal-Binding Propensity in the Mitochondrial Dynamin-Related Protein 1.

Authors:  Krishnendu Roy; Thomas J Pucadyil
Journal:  J Membr Biol       Date:  2022-02-26       Impact factor: 1.843

5.  Is Drp1 sufficient to catalyze membrane fission?

Authors:  Krishnendu Roy; Thomas J Pucadyil
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-21       Impact factor: 12.779

6.  A simple supported tubulated bilayer system for evaluating protein-mediated membrane remodeling.

Authors:  Noah A Schenk; Peter J Dahl; Michael G Hanna; Anjon Audhya; Gregory G Tall; Jefferson D Knight; Arun Anantharam
Journal:  Chem Phys Lipids       Date:  2018-07-22       Impact factor: 3.329

7.  The pleckstrin-homology domain of dynamin is dispensable for membrane constriction and fission.

Authors:  Srishti Dar; Thomas J Pucadyil
Journal:  Mol Biol Cell       Date:  2016-11-09       Impact factor: 4.138

8.  Dynamin-related protein 1 has membrane constricting and severing abilities sufficient for mitochondrial and peroxisomal fission.

Authors:  Sukrut C Kamerkar; Felix Kraus; Alice J Sharpe; Thomas J Pucadyil; Michael T Ryan
Journal:  Nat Commun       Date:  2018-12-07       Impact factor: 14.919

9.  ATP-dependent membrane remodeling links EHD1 functions to endocytic recycling.

Authors:  Raunaq Deo; Manish S Kushwah; Sukrut C Kamerkar; Nagesh Y Kadam; Srishti Dar; Kavita Babu; Anand Srivastava; Thomas J Pucadyil
Journal:  Nat Commun       Date:  2018-12-05       Impact factor: 14.919

10.  A Screen for Membrane Fission Catalysts Identifies the ATPase EHD1.

Authors:  Sukrut C Kamerkar; Krishnendu Roy; Soumya Bhattacharyya; Thomas J Pucadyil
Journal:  Biochemistry       Date:  2018-11-16       Impact factor: 3.162

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