Literature DB >> 35218392

Metal-Binding Propensity in the Mitochondrial Dynamin-Related Protein 1.

Krishnendu Roy1, Thomas J Pucadyil2.   

Abstract

Dynamin-related protein1 (Drp1) functions to divide mitochondria and peroxisomes by binding specific adaptor proteins and lipids, both of which are integral to the limiting organellar membrane. In efforts to understand how such multivalent interactions regulate Drp1 functions, in vitro reconstitution schemes rely on recruiting soluble portions of the adaptors appended with genetically encoded polyhistidine tags onto membranes containing Ni2+-bound chelator lipids. These strategies are facile and circumvent the challenge in working with membrane proteins but assume that binding is specific to proteins carrying the polyhistidine tag. Here, we find using chelator lipids and chelator beads that both native and recombinant Drp1 directly bind Ni2+ ions. Metal binding, therefore, represents a potential strategy to deplete or purify Drp1 from native tissue lysates. Importantly, high concentrations of the metal in solution inhibit GTP hydrolysis and renders Drp1 inactive in membrane fission. Together, our results emphasize a metal-binding propensity, which could significantly impact Drp1 functions.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Drp1; GTPase activity; Membrane fission; Protein-lipid interactions; Transition metal binding

Mesh:

Substances:

Year:  2022        PMID: 35218392     DOI: 10.1007/s00232-022-00221-5

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  26 in total

Review 1.  Building a fission machine--structural insights into dynamin assembly and activation.

Authors:  Joshua S Chappie; Fred Dyda
Journal:  J Cell Sci       Date:  2013-06-18       Impact factor: 5.285

2.  A brain-enriched Drp1 isoform associates with lysosomes, late endosomes, and the plasma membrane.

Authors:  Kie Itoh; Yoshihiro Adachi; Tatsuya Yamada; Takamichi L Suzuki; Takanobu Otomo; Heidi M McBride; Tamotsu Yoshimori; Miho Iijima; Hiromi Sesaki
Journal:  J Biol Chem       Date:  2018-05-31       Impact factor: 5.157

3.  PLiMAP: Proximity-Based Labeling of Membrane-Associated Proteins.

Authors:  Gregor P Jose; Thomas J Pucadyil
Journal:  Curr Protoc Protein Sci       Date:  2020-09

4.  Using Scaffold Liposomes to Reconstitute Lipid-proximal Protein-protein Interactions In Vitro.

Authors:  Ryan W Clinton; Jason A Mears
Journal:  J Vis Exp       Date:  2017-01-11       Impact factor: 1.355

5.  Dynamin-related Protein 1 Oligomerization in Solution Impairs Functional Interactions with Membrane-anchored Mitochondrial Fission Factor.

Authors:  Ryan W Clinton; Christopher A Francy; Rajesh Ramachandran; Xin Qi; Jason A Mears
Journal:  J Biol Chem       Date:  2015-11-17       Impact factor: 5.157

Review 6.  Zinc inhibition of cellular energy production: implications for mitochondria and neurodegeneration.

Authors:  Kirk E Dineley; Tatyana V Votyakova; Ian J Reynolds
Journal:  J Neurochem       Date:  2003-05       Impact factor: 5.372

7.  Use of the supported membrane tube assay system for real-time analysis of membrane fission reactions.

Authors:  Srishti Dar; Sukrut C Kamerkar; Thomas J Pucadyil
Journal:  Nat Protoc       Date:  2017-01-26       Impact factor: 13.491

8.  A high-throughput platform for real-time analysis of membrane fission reactions reveals dynamin function.

Authors:  Srishti Dar; Sukrut C Kamerkar; Thomas J Pucadyil
Journal:  Nat Cell Biol       Date:  2015-10-19       Impact factor: 28.824

9.  Cryo-EM Studies of Drp1 Reveal Cardiolipin Interactions that Activate the Helical Oligomer.

Authors:  Christopher A Francy; Ryan W Clinton; Chris Fröhlich; Colleen Murphy; Jason A Mears
Journal:  Sci Rep       Date:  2017-09-06       Impact factor: 4.379

10.  Specific interaction with cardiolipin triggers functional activation of Dynamin-Related Protein 1.

Authors:  Itsasne Bustillo-Zabalbeitia; Sylvie Montessuit; Etienne Raemy; Gorka Basañez; Oihana Terrones; Jean-Claude Martinou
Journal:  PLoS One       Date:  2014-07-18       Impact factor: 3.240

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