Literature DB >> 26440265

Optimal mass transport for shape matching and comparison.

Zhengyu Su, Yalin Wang, Rui Shi, Wei Zeng, Jian Sun, Feng Luo, Xianfeng Gu.   

Abstract

Surface based 3D shape analysis plays a fundamental role in computer vision and medical imaging. This work proposes to use optimal mass transport map for shape matching and comparison, focusing on two important applications including surface registration and shape space. The computation of the optimal mass transport map is based on Monge-Brenier theory, in comparison to the conventional method based on Monge-Kantorovich theory, this method significantly improves the efficiency by reducing computational complexity from O(n(2)) to O(n) . For surface registration problem, one commonly used approach is to use conformal map to convert the shapes into some canonical space. Although conformal mappings have small angle distortions, they may introduce large area distortions which are likely to cause numerical instability thus resulting failures of shape analysis. This work proposes to compose the conformal map with the optimal mass transport map to get the unique area-preserving map, which is intrinsic to the Riemannian metric, unique, and diffeomorphic. For shape space study, this work introduces a novel Riemannian framework, Conformal Wasserstein Shape Space, by combing conformal geometry and optimal mass transport theory. In our work, all metric surfaces with the disk topology are mapped to the unit planar disk by a conformal mapping, which pushes the area element on the surface to a probability measure on the disk. The optimal mass transport provides a map from the shape space of all topological disks with metrics to the Wasserstein space of the disk and the pullback Wasserstein metric equips the shape space with a Riemannian metric. We validate our work by numerous experiments and comparisons with prior approaches and the experimental results demonstrate the efficiency and efficacy of our proposed approach.

Entities:  

Mesh:

Year:  2015        PMID: 26440265      PMCID: PMC4602172          DOI: 10.1109/TPAMI.2015.2408346

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  25 in total

1.  Elastic geodesic paths in shape space of parameterized surfaces.

Authors:  Sebastian Kurtek; Eric Klassen; John C Gore; Zhaohua Ding; Anuj Srivastava
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2012-09       Impact factor: 6.226

2.  Morphometric analysis of lateral ventricles in schizophrenia and healthy controls regarding genetic and disease-specific factors.

Authors:  Martin Styner; Jeffrey A Lieberman; Robert K McClure; Daniel R Weinberger; Douglas W Jones; Guido Gerig
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-16       Impact factor: 11.205

3.  Three-dimensional face recognition in the presence of facial expressions: an annotated deformable model approach.

Authors:  Ioannis A Kakadiaris; Georgios Passalis; George Toderici; Mohammed N Murtuza; Yunliang Lu; Nikos Karampatziakis; Theoharis Theoharis
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2007-04       Impact factor: 6.226

4.  Brain surface conformal parameterization with the Ricci flow.

Authors:  Yalin Wang; Jie Shi; Xiaotian Yin; Xianfeng Gu; Tony F Chan; Shing-Tung Yau; Arthur W Toga; Paul M Thompson
Journal:  IEEE Trans Med Imaging       Date:  2011-09-15       Impact factor: 10.048

5.  Automatic alignment of genus-zero surfaces.

Authors:  Patrice Koehl; Joel Hass
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2014-03       Impact factor: 6.226

6.  Subregional neuroanatomical change as a biomarker for Alzheimer's disease.

Authors:  Dominic Holland; James B Brewer; Donald J Hagler; Christine Fennema-Notestine; Christine Fenema-Notestine; Anders M Dale
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-08       Impact factor: 11.205

7.  Texture mapping via optimal mass transport.

Authors:  Ayelet Dominitz; Allen Tannenbaum
Journal:  IEEE Trans Vis Comput Graph       Date:  2010 May-Jun       Impact factor: 4.579

8.  Surface fluid registration of conformal representation: application to detect disease burden and genetic influence on hippocampus.

Authors:  Jie Shi; Paul M Thompson; Boris Gutman; Yalin Wang
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

9.  Discrete conformal methods for cortical brain flattening.

Authors:  Monica K Hurdal; Ken Stephenson
Journal:  Neuroimage       Date:  2008-11-11       Impact factor: 6.556

10.  FOCUSR: feature oriented correspondence using spectral regularization--a method for precise surface matching.

Authors:  Herve Lombaert; Leo Grady; Jonathan R Polimeni; Farida Cheriet
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2013-09       Impact factor: 6.226

View more
  11 in total

1.  Conformal invariants for multiply connected surfaces: Application to landmark curve-based brain morphometry analysis.

Authors:  Jie Shi; Wen Zhang; Miao Tang; Richard J Caselli; Yalin Wang
Journal:  Med Image Anal       Date:  2016-09-06       Impact factor: 8.545

2.  Hyperbolic Wasserstein Distance for Shape Indexing.

Authors:  Jie Shi; Yalin Wang
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2019-02-08       Impact factor: 6.226

3.  Computing Univariate Neurodegenerative Biomarkers with Volumetric Optimal Transportation: A Pilot Study.

Authors:  Yanshuai Tu; Liang Mi; Wen Zhang; Haomeng Zhang; Junwei Zhang; Yonghui Fan; Dhruman Goradia; Kewei Chen; Richard J Caselli; Eric M Reiman; Xianfeng Gu; Yalin Wang
Journal:  Neuroinformatics       Date:  2020-10

4.  The bumps under the hippocampus.

Authors:  Cheng Chang; Chuan Huang; Naiyun Zhou; Shawn Xiang Li; Lawrence Ver Hoef; Yi Gao
Journal:  Hum Brain Mapp       Date:  2017-10-23       Impact factor: 5.038

5.  Enhancing Diffusion MRI Measures By Integrating Grey and White Matter Morphometry With Hyperbolic Wasserstein Distance.

Authors:  Wen Zhang; Jie Shi; Jun Yu; Liang Zhan; Paul M Thompson; Yalin Wang
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2017-06-19

6.  Shape Analysis with Hyperbolic Wasserstein Distance.

Authors:  Jie Shi; Wen Zhang; Yalin Wang
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2016-12-12

7.  Cortical Surface Shape Analysis Based on Alexandrov Polyhedra.

Authors:  Min Zhang; Yang Guo; Na Lei; Zhou Zhao; Jianfeng Wu; Xiaoyin Xu; Yalin Wang; Xianfeng Gu
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2021-10

8.  Quantifying Tensor Field Similarity With Global Distributions and Optimal Transport.

Authors:  Arnold D Gomez; Maureen L Stone; Philip V Bayly; Jerry L Prince
Journal:  Med Image Comput Comput Assist Interv       Date:  2018-09-26

9.  Isometry Invariant Shape Descriptors for Abnormality Detection on Brain Surfaces Affected by Alzheimer's Disease.

Authors:  Yanshuai Tu; Chengfeng Wen; Wen Zhang; Jianfeng Wu; Jie Zhang; Kewei Chen; Richard J Caselli; Eric M Reiman; Eric M Reiman; Yalin Wang
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2018-07

10.  Cortical Morphometry Analysis based on Worst Transportation Theory.

Authors:  Min Zhang; Dongsheng An; Na Lei; Jianfeng Wu; Tong Zhao; Xiaoyin Xu; Yalin Wang; Xianfeng Gu
Journal:  Inf Process Med Imaging       Date:  2021-06-14
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.