Literature DB >> 26424572

Lessons from Ebola: Improving infectious disease surveillance to inform outbreak management.

Mark E J Woolhouse1, Andrew Rambaut2, Paul Kellam3.   

Abstract

The current Ebola virus disease outbreak in West Africa has revealed serious shortcomings in national and international capacity to detect, monitor, and respond to infectious disease outbreaks as they occur. Recent advances in diagnostics, risk mapping, mathematical modeling, pathogen genome sequencing, phylogenetics, and phylogeography have the potential to improve substantially the quantity and quality of information available to guide the public health response to outbreaks of all kinds.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID： 26424572      PMCID： PMC5819730          DOI： 10.1126/scitranslmed.aab0191

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN： 1946-6234            Impact factor:   17.956


  42 in total

1.  Seroevidence for H5N1 influenza infections in humans: meta-analysis.

Authors:  Taia T Wang; Michael K Parides; Peter Palese
Journal:  Science       Date:  2012-02-23       Impact factor: 47.728

2.  Human immunodeficiency virus reverse transcriptase and protease sequence database.

Authors:  Soo-Yon Rhee; Matthew J Gonzales; Rami Kantor; Bradley J Betts; Jaideep Ravela; Robert W Shafer
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

3.  Explaining observed infection and antibody age-profiles in populations with urogenital schistosomiasis.

Authors:  Kate M Mitchell; Francisca Mutapi; Nicholas J Savill; Mark E J Woolhouse
Journal:  PLoS Comput Biol       Date:  2011-10-20       Impact factor: 4.475

4.  Sero-prevalence and incidence of A/H1N1 2009 influenza infection in Scotland in winter 2009-2010.

Authors:  Nigel J McLeish; Peter Simmonds; Chris Robertson; Ian Handel; Mark McGilchrist; Brajendra K Singh; Shona Kerr; Margo E Chase-Topping; Katy Sinka; Mark Bronsvoort; David J Porteous; William Carman; James McMenamin; Andrew Leigh-Brown; Mark E J Woolhouse
Journal:  PLoS One       Date:  2011-06-08       Impact factor: 3.240

5.  The age-specific cumulative incidence of infection with pandemic influenza H1N1 2009 was similar in various countries prior to vaccination.

Authors:  Heath Kelly; Heidi A Peck; Karen L Laurie; Peng Wu; Hiroshi Nishiura; Benjamin J Cowling
Journal:  PLoS One       Date:  2011-08-05       Impact factor: 3.240

Review 6.  Middle East respiratory syndrome: An emerging coronavirus infection tracked by the crowd.

Authors:  Ian M Mackay; Katherine E Arden
Journal:  Virus Res       Date:  2015-02-02       Impact factor: 3.303

7.  Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints.

Authors:  Nuno Rodrigues Faria; Marc A Suchard; Andrew Rambaut; Daniel G Streicker; Philippe Lemey
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

8.  Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions.

Authors:  Stéphane Hué; Alison E Brown; Manon Ragonnet-Cronin; Samantha J Lycett; David T Dunn; Esther Fearnhill; David I Dolling; Anton Pozniak; Deenan Pillay; Valerie C Delpech; Andrew J Leigh Brown
Journal:  AIDS       Date:  2014-08-24       Impact factor: 4.177

9.  Infectious disease: tough choices to reduce Ebola transmission.

Authors:  Christopher J M Whitty; Jeremy Farrar; Neil Ferguson; W John Edmunds; Peter Piot; Melissa Leach; Sally C Davies
Journal:  Nature       Date:  2014-11-13       Impact factor: 49.962

10.  Reassessing Google Flu Trends data for detection of seasonal and pandemic influenza: a comparative epidemiological study at three geographic scales.

Authors:  Donald R Olson; Kevin J Konty; Marc Paladini; Cecile Viboud; Lone Simonsen
Journal:  PLoS Comput Biol       Date:  2013-10-17       Impact factor: 4.475
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  34 in total

1.  Essential information: Uncertainty and optimal control of Ebola outbreaks.

Authors:  Shou-Li Li; Ottar N Bjørnstad; Matthew J Ferrari; Riley Mummah; Michael C Runge; Christopher J Fonnesbeck; Michael J Tildesley; William J M Probert; Katriona Shea
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-15       Impact factor: 11.205

2.  A Relaxed Directional Random Walk Model for Phylogenetic Trait Evolution.

Authors:  Mandev S Gill; Lam Si Tung Ho; Guy Baele; Philippe Lemey; Marc A Suchard
Journal:  Syst Biol       Date:  2017-05-01       Impact factor: 15.683

Review 3.  The evolution of Ebola virus: Insights from the 2013-2016 epidemic.

Authors:  Edward C Holmes; Gytis Dudas; Andrew Rambaut; Kristian G Andersen
Journal:  Nature       Date:  2016-10-13       Impact factor: 49.962

4.  Development, Evaluation, and Integration of a Quantitative Reverse-Transcription Polymerase Chain Reaction Diagnostic Test for Ebola Virus on a Molecular Diagnostics Platform.

Authors:  Lieselotte Cnops; Peter Van den Eede; James Pettitt; Leo Heyndrickx; Birgit De Smet; Sandra Coppens; Ilse Andries; Theresa Pattery; Luc Van Hove; Geert Meersseman; Sari Van Den Herrewegen; Nicolas Vergauwe; Rein Thijs; Peter B Jahrling; David Nauwelaers; Kevin K Ariën
Journal:  J Infect Dis       Date:  2016-05-30       Impact factor: 5.226

5.  Big Data for Infectious Disease Surveillance and Modeling.

Authors:  Shweta Bansal; Gerardo Chowell; Lone Simonsen; Alessandro Vespignani; Cécile Viboud
Journal:  J Infect Dis       Date:  2016-12-01       Impact factor: 5.226

Review 6.  Infectious Disease Surveillance in the Big Data Era: Towards Faster and Locally Relevant Systems.

Authors:  Lone Simonsen; Julia R Gog; Don Olson; Cécile Viboud
Journal:  J Infect Dis       Date:  2016-12-01       Impact factor: 5.226

7.  Microfluidic System for Detection of Viral RNA in Blood Using a Barcode Fluorescence Reporter and a Photocleavable Capture Probe.

Authors:  Ke Du; Myeongkee Park; Anthony Griffiths; Ricardo Carrion; Jean Patterson; Holger Schmidt; Richard Mathies
Journal:  Anal Chem       Date:  2017-11-07       Impact factor: 6.986

8.  Virus genomes reveal factors that spread and sustained the Ebola epidemic.

Authors:  Gytis Dudas; Luiz Max Carvalho; Trevor Bedford; Andrew J Tatem; Guy Baele; Nuno R Faria; Daniel J Park; Jason T Ladner; Armando Arias; Danny Asogun; Filip Bielejec; Sarah L Caddy; Matthew Cotten; Jonathan D'Ambrozio; Simon Dellicour; Antonino Di Caro; Joseph W Diclaro; Sophie Duraffour; Michael J Elmore; Lawrence S Fakoli; Ousmane Faye; Merle L Gilbert; Sahr M Gevao; Stephen Gire; Adrianne Gladden-Young; Andreas Gnirke; Augustine Goba; Donald S Grant; Bart L Haagmans; Julian A Hiscox; Umaru Jah; Jeffrey R Kugelman; Di Liu; Jia Lu; Christine M Malboeuf; Suzanne Mate; David A Matthews; Christian B Matranga; Luke W Meredith; James Qu; Joshua Quick; Suzan D Pas; My V T Phan; Georgios Pollakis; Chantal B Reusken; Mariano Sanchez-Lockhart; Stephen F Schaffner; John S Schieffelin; Rachel S Sealfon; Etienne Simon-Loriere; Saskia L Smits; Kilian Stoecker; Lucy Thorne; Ekaete Alice Tobin; Mohamed A Vandi; Simon J Watson; Kendra West; Shannon Whitmer; Michael R Wiley; Sarah M Winnicki; Shirlee Wohl; Roman Wölfel; Nathan L Yozwiak; Kristian G Andersen; Sylvia O Blyden; Fatorma Bolay; Miles W Carroll; Bernice Dahn; Boubacar Diallo; Pierre Formenty; Christophe Fraser; George F Gao; Robert F Garry; Ian Goodfellow; Stephan Günther; Christian T Happi; Edward C Holmes; Brima Kargbo; Sakoba Keïta; Paul Kellam; Marion P G Koopmans; Jens H Kuhn; Nicholas J Loman; N'Faly Magassouba; Dhamari Naidoo; Stuart T Nichol; Tolbert Nyenswah; Gustavo Palacios; Oliver G Pybus; Pardis C Sabeti; Amadou Sall; Ute Ströher; Isatta Wurie; Marc A Suchard; Philippe Lemey; Andrew Rambaut
Journal:  Nature       Date:  2017-04-12       Impact factor: 49.962

9.  Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes.

Authors:  Alexandra Moura; Alexis Criscuolo; Hannes Pouseele; Mylène M Maury; Alexandre Leclercq; Cheryl Tarr; Jonas T Björkman; Timothy Dallman; Aleisha Reimer; Vincent Enouf; Elise Larsonneur; Heather Carleton; Hélène Bracq-Dieye; Lee S Katz; Louis Jones; Marie Touchon; Mathieu Tourdjman; Matthew Walker; Steven Stroika; Thomas Cantinelli; Viviane Chenal-Francisque; Zuzana Kucerova; Eduardo P C Rocha; Celine Nadon; Kathie Grant; Eva M Nielsen; Bruno Pot; Peter Gerner-Smidt; Marc Lecuit; Sylvain Brisse
Journal:  Nat Microbiol       Date:  2016-10-10       Impact factor: 17.745

10.  Seasonal influenza vaccination policies in the 194 WHO Member States: The evolution of global influenza pandemic preparedness and the challenge of sustaining equitable vaccine access.

Authors:  Kathleen F Morales; David W Brown; Laure Dumolard; Claudia Steulet; Alba Vilajeliu; Alba Maria Ropero Alvarez; Ann Moen; Martin Friede; Philipp Lambach
Journal:  Vaccine X       Date:  2021-04-20
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