Literature DB >> 26339031

Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.

Maria A Schumacher1, Nam K Tonthat2, Jeehyun Lee2, Fernando A Rodriguez-Castañeda3, Naga Babu Chinnam2, Anne K Kalliomaa-Sanford3, Irene W Ng3, Madhuri T Barge3, Porsha L R Shaw2, Daniela Barillà4.   

Abstract

Although recent studies have provided a wealth of information about archaeal biology, nothing is known about the molecular basis of DNA segregation in these organisms. Here, we unveil the machinery and assembly mechanism of the archaeal Sulfolobus pNOB8 partition system. This system uses three proteins: ParA; an atypical ParB adaptor; and a centromere-binding component, AspA. AspA utilizes a spreading mechanism to create a DNA superhelix onto which ParB assembles. This supercomplex links to the ParA motor, which contains a bacteria-like Walker motif. The C domain of ParB harbors structural similarity to CenpA, which dictates eukaryotic segregation. Thus, this archaeal system combines bacteria-like and eukarya-like components, which suggests the possible conservation of DNA segregation principles across the three domains of life.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 26339031      PMCID: PMC4844061          DOI: 10.1126/science.aaa9046

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  29 in total

Review 1.  Plasmid and chromosome partitioning: surprises from phylogeny.

Authors:  K Gerdes; J Møller-Jensen; R Bugge Jensen
Journal:  Mol Microbiol       Date:  2000-08       Impact factor: 3.501

2.  Structural analysis of the chromosome segregation protein Spo0J from Thermus thermophilus.

Authors:  Thomas A Leonard; P Jonathan G Butler; Jan Löwe
Journal:  Mol Microbiol       Date:  2004-07       Impact factor: 3.501

3.  Global rigid body modeling of macromolecular complexes against small-angle scattering data.

Authors:  Maxim V Petoukhov; Dmitri I Svergun
Journal:  Biophys J       Date:  2005-05-27       Impact factor: 4.033

Review 4.  Chromosome organization and segregation in bacteria.

Authors:  Martin Thanbichler; Lucy Shapiro
Journal:  J Struct Biol       Date:  2006-06-06       Impact factor: 2.867

Review 5.  The origin and evolution of Archaea: a state of the art.

Authors:  Simonetta Gribaldo; Celine Brochier-Armanet
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-06-29       Impact factor: 6.237

6.  Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA.

Authors:  Thomas D Dunham; Weijun Xu; Barbara E Funnell; Maria A Schumacher
Journal:  EMBO J       Date:  2009-05-21       Impact factor: 11.598

7.  Crystal structure of the human centromeric nucleosome containing CENP-A.

Authors:  Hiroaki Tachiwana; Wataru Kagawa; Tatsuya Shiga; Akihisa Osakabe; Yuta Miya; Kengo Saito; Yoko Hayashi-Takanaka; Takashi Oda; Mamoru Sato; Sam-Yong Park; Hiroshi Kimura; Hitoshi Kurumizaka
Journal:  Nature       Date:  2011-07-10       Impact factor: 49.962

Review 8.  The ABCs of plasmid replication and segregation.

Authors:  Uelinton M Pinto; Katherine M Pappas; Stephen C Winans
Journal:  Nat Rev Microbiol       Date:  2012-11       Impact factor: 60.633

9.  Genetic profile of pNOB8 from Sulfolobus: the first conjugative plasmid from an archaeon.

Authors:  Q She; H Phan; R A Garrett; S V Albers; K M Stedman; W Zillig
Journal:  Extremophiles       Date:  1998-11       Impact factor: 2.395

10.  CENPA a genomic marker for centromere activity and human diseases.

Authors:  Manuel M Valdivia; Khaoula Hamdouch; Manuela Ortiz; Antonio Astola
Journal:  Curr Genomics       Date:  2009-08       Impact factor: 2.236

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  20 in total

Review 1.  Mechanisms of gene flow in archaea.

Authors:  Alexander Wagner; Rachel J Whitaker; David J Krause; Jan-Hendrik Heilers; Marleen van Wolferen; Chris van der Does; Sonja-Verena Albers
Journal:  Nat Rev Microbiol       Date:  2017-05-15       Impact factor: 60.633

Review 2.  Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria).

Authors:  Thomas Cavalier-Smith; Ema E-Yung Chao
Journal:  Protoplasma       Date:  2020-01-03       Impact factor: 3.356

Review 3.  Stereochemistry and Validation of Macromolecular Structures.

Authors:  Alexander Wlodawer
Journal:  Methods Mol Biol       Date:  2017

Review 4.  Catching a Walker in the Act-DNA Partitioning by ParA Family of Proteins.

Authors:  Dipika Mishra; Ramanujam Srinivasan
Journal:  Front Microbiol       Date:  2022-05-26       Impact factor: 6.064

5.  Identification, Characterization, and Application of the Replicon Region of the Halophilic Temperate Sphaerolipovirus SNJ1.

Authors:  Yuchen Wang; Linshan Sima; Jie Lv; Suiyuan Huang; Ying Liu; Jiao Wang; Mart Krupovic; Xiangdong Chen
Journal:  J Bacteriol       Date:  2016-06-27       Impact factor: 3.490

6.  SbnI is a free serine kinase that generates O -phospho-l-serine for staphyloferrin B biosynthesis in Staphylococcus aureus.

Authors:  Meghan M Verstraete; Cecilia Perez-Borrajero; Kirstin L Brown; David E Heinrichs; Michael E P Murphy
Journal:  J Biol Chem       Date:  2018-02-26       Impact factor: 5.157

7.  Self-organization of parS centromeres by the ParB CTP hydrolase.

Authors:  Young-Min Soh; Iain Finley Davidson; Stefano Zamuner; Jérôme Basquin; Florian Patrick Bock; Michael Taschner; Jan-Willem Veening; Paolo De Los Rios; Jan-Michael Peters; Stephan Gruber
Journal:  Science       Date:  2019-10-24       Impact factor: 47.728

8.  Functional amyloids as inhibitors of plasmid DNA replication.

Authors:  Laura Molina-García; Fátima Gasset-Rosa; María Moreno-Del Álamo; M Elena Fernández-Tresguerres; Susana Moreno-Díaz de la Espina; Rudi Lurz; Rafael Giraldo
Journal:  Sci Rep       Date:  2016-05-05       Impact factor: 4.379

Review 9.  Driving Apart and Segregating Genomes in Archaea.

Authors:  Daniela Barillà
Journal:  Trends Microbiol       Date:  2016-07-20       Impact factor: 17.079

10.  Correcting the record of structural publications requires joint effort of the community and journal editors.

Authors:  Bernhard Rupp; Alexander Wlodawer; Wladek Minor; John R Helliwell; Mariusz Jaskolski
Journal:  FEBS J       Date:  2016-06-10       Impact factor: 5.542

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