Literature DB >> 26299477

Histone variants and cellular plasticity.

Stephen W Santoro1, Catherine Dulac2.   

Abstract

The broad diversity of cell types within vertebrates arises from a unique genetic blueprint by combining intrinsic cellular information with developmental and other extrinsic signals. Lying at the interface between cellular signals and the DNA is the chromatin, a dynamic nucleoprotein complex that helps to mediate gene regulation. The most basic subunit of chromatin, the nucleosome, consists of DNA wrapped around histones, a set of proteins that play crucial roles as scaffolding molecules and regulators of gene expression. Growing evidence indicates that canonical histones are commonly replaced by protein variants before and during cellular transitions. We highlight exciting new results suggesting that histone variants are essential players in the control of cellular plasticity during development and in the adult nervous system.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  brain; cellular plasticity; development; epigenetics; histone variants; neuron

Mesh:

Substances:

Year:  2015        PMID: 26299477      PMCID: PMC5111554          DOI: 10.1016/j.tig.2015.07.005

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  112 in total

1.  Localized H3K36 methylation states define histone H4K16 acetylation during transcriptional elongation in Drosophila.

Authors:  Oliver Bell; Christiane Wirbelauer; Marc Hild; Annette N D Scharf; Michaela Schwaiger; David M MacAlpine; Frédéric Zilbermann; Fred van Leeuwen; Stephen P Bell; Axel Imhof; Dan Garza; Antoine H F M Peters; Dirk Schübeler
Journal:  EMBO J       Date:  2007-11-15       Impact factor: 11.598

2.  Two chemically and metabolically distinct forms of calf thymus histone F3.

Authors:  W F Marzluff; L A Sanders; D M Miller; K S McCarty
Journal:  J Biol Chem       Date:  1972-04-10       Impact factor: 5.157

3.  H2AZ is enriched at polycomb complex target genes in ES cells and is necessary for lineage commitment.

Authors:  Menno P Creyghton; Styliani Markoulaki; Stuart S Levine; Jacob Hanna; Michael A Lodato; Ky Sha; Richard A Young; Rudolf Jaenisch; Laurie A Boyer
Journal:  Cell       Date:  2008-11-06       Impact factor: 41.582

Review 4.  Anatomy of a blastocyst: cell behaviors driving cell fate choice and morphogenesis in the early mouse embryo.

Authors:  Nadine Schrode; Panagiotis Xenopoulos; Anna Piliszek; Stephen Frankenberg; Berenika Plusa; Anna-Katerina Hadjantonakis
Journal:  Genesis       Date:  2013-02-25       Impact factor: 2.487

5.  Histone H2A.Z subunit exchange controls consolidation of recent and remote memory.

Authors:  Iva B Zovkic; Brynna S Paulukaitis; Jeremy J Day; Deepa M Etikala; J David Sweatt
Journal:  Nature       Date:  2014-09-14       Impact factor: 49.962

6.  The developmental potential of iPSCs is greatly influenced by reprogramming factor selection.

Authors:  Yosef Buganim; Styliani Markoulaki; Niek van Wietmarschen; Heather Hoke; Tao Wu; Kibibi Ganz; Batool Akhtar-Zaidi; Yupeng He; Brian J Abraham; David Porubsky; Elisabeth Kulenkampff; Dina A Faddah; Linyu Shi; Qing Gao; Sovan Sarkar; Malkiel Cohen; Johanna Goldmann; Joseph R Nery; Matthew D Schultz; Joseph R Ecker; Andrew Xiao; Richard A Young; Peter M Lansdorp; Rudolf Jaenisch
Journal:  Cell Stem Cell       Date:  2014-09-04       Impact factor: 24.633

Review 7.  "Seq-ing" insights into the epigenetics of neuronal gene regulation.

Authors:  Francesca Telese; Amir Gamliel; Dorota Skowronska-Krawczyk; Ivan Garcia-Bassets; Michael G Rosenfeld
Journal:  Neuron       Date:  2013-02-20       Impact factor: 17.173

8.  Histone variant macroH2A confers resistance to nuclear reprogramming.

Authors:  Vincent Pasque; Astrid Gillich; Nigel Garrett; John B Gurdon
Journal:  EMBO J       Date:  2011-05-06       Impact factor: 11.598

9.  Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.

Authors:  Simon J Elsässer; Laura A Banaszynski; Kyung-Min Noh; Nichole Diaz; C David Allis
Journal:  Nature       Date:  2015-05-04       Impact factor: 49.962

10.  The activity-dependent histone variant H2BE modulates the life span of olfactory neurons.

Authors:  Stephen W Santoro; Catherine Dulac
Journal:  Elife       Date:  2012-12-13       Impact factor: 8.140

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  12 in total

Review 1.  Multiple Functions of the Eya Phosphotyrosine Phosphatase.

Authors:  Ilaria Rebay
Journal:  Mol Cell Biol       Date:  2015-12-14       Impact factor: 4.272

2.  Epigenetic regulation of cellular and cytomegalovirus genes during myeloid cell development.

Authors:  Xue-Feng Liu; Mary Hummel; Michael Abecassis
Journal:  Intern Med Rev (Wash D C)       Date:  2017-03

Review 3.  Emerging roles of the histone chaperone CAF-1 in cellular plasticity.

Authors:  Sihem Cheloufi; Konrad Hochedlinger
Journal:  Curr Opin Genet Dev       Date:  2017-07-07       Impact factor: 5.578

4.  Neural progenitor cells mediated by H2A.Z.2 regulate microglial development via Cxcl14 in the embryonic brain.

Authors:  Zhongqiu Li; Yanxin Li; Jianwei Jiao
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-11       Impact factor: 11.205

5.  Genotypic divergence in mouse oocyte transcriptomes: possible pathways to hybrid vigor impacting fertility and embryogenesis.

Authors:  Ashley L Severance; Uros Midic; Keith E Latham
Journal:  Physiol Genomics       Date:  2019-12-23       Impact factor: 3.107

Review 6.  Epigenetics as "conductor" in "orchestra" of pluripotent states.

Authors:  Ishita Baral; Pallavi Chinnu Varghese; Debasree Dutta
Journal:  Cell Tissue Res       Date:  2022-07-15       Impact factor: 4.051

Review 7.  Direct cell reprogramming: approaches, mechanisms and progress.

Authors:  Haofei Wang; Yuchen Yang; Jiandong Liu; Li Qian
Journal:  Nat Rev Mol Cell Biol       Date:  2021-02-22       Impact factor: 113.915

8.  HistoneDB 2.0: a histone database with variants--an integrated resource to explore histones and their variants.

Authors:  Eli J Draizen; Alexey K Shaytan; Leonardo Mariño-Ramírez; Paul B Talbert; David Landsman; Anna R Panchenko
Journal:  Database (Oxford)       Date:  2016-03-17       Impact factor: 3.451

Review 9.  The Roles of Long Non-Protein-Coding RNAs in Osteo-Adipogenic Lineage Commitment.

Authors:  Hirotaka Yoshioka; Yuji Yoshiko
Journal:  Int J Mol Sci       Date:  2017-06-09       Impact factor: 5.923

Review 10.  The Adenine/Thymine Deleterious Selection Model for GC Content Evolution at the Third Codon Position of the Histone Genes in Drosophila.

Authors:  Yoshinori Matsuo
Journal:  Genes (Basel)       Date:  2021-05-12       Impact factor: 4.096

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