Literature DB >> 33619373

Direct cell reprogramming: approaches, mechanisms and progress.

Haofei Wang1,2, Yuchen Yang1,2, Jiandong Liu1,2, Li Qian3,4.   

Abstract

The reprogramming of somatic cells with defined factors, which converts cells from one lineage into cells of another, has greatly reshaped our traditional views on cell identity and cell fate determination. Direct reprogramming (also known as transdifferentiation) refers to cell fate conversion without transitioning through an intermediary pluripotent state. Given that the number of cell types that can be generated by direct reprogramming is rapidly increasing, it has become a promising strategy to produce functional cells for therapeutic purposes. This Review discusses the evolution of direct reprogramming from a transcription factor-based method to a small-molecule-driven approach, the recent progress in enhancing reprogrammed cell maturation, and the challenges associated with in vivo direct reprogramming for translational applications. It also describes our current understanding of the molecular mechanisms underlying direct reprogramming, including the role of transcription factors, epigenetic modifications, non-coding RNAs, and the function of metabolic reprogramming, and highlights novel insights gained from single-cell omics studies.

Entities:  

Mesh:

Year:  2021        PMID: 33619373      PMCID: PMC8161510          DOI: 10.1038/s41580-021-00335-z

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   113.915


  178 in total

1.  Induced pluripotent stem cells: past, present, and future.

Authors:  Shinya Yamanaka
Journal:  Cell Stem Cell       Date:  2012-06-14       Impact factor: 24.633

Review 2.  Molecular features of cellular reprogramming and development.

Authors:  Zachary D Smith; Camille Sindhu; Alexander Meissner
Journal:  Nat Rev Mol Cell Biol       Date:  2016-02-17       Impact factor: 94.444

Review 3.  In Vivo Cellular Reprogramming: The Next Generation.

Authors:  Deepak Srivastava; Natalie DeWitt
Journal:  Cell       Date:  2016-09-08       Impact factor: 41.582

4.  Expression of a single transfected cDNA converts fibroblasts to myoblasts.

Authors:  R L Davis; H Weintraub; A B Lassar
Journal:  Cell       Date:  1987-12-24       Impact factor: 41.582

Review 5.  In Vivo Reprogramming for CNS Repair: Regenerating Neurons from Endogenous Glial Cells.

Authors:  Hedong Li; Gong Chen
Journal:  Neuron       Date:  2016-08-17       Impact factor: 17.173

6.  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Cell       Date:  2006-08-10       Impact factor: 41.582

7.  Stimulation of functional neuronal regeneration from Müller glia in adult mice.

Authors:  Nikolas L Jorstad; Matthew S Wilken; William N Grimes; Stefanie G Wohl; Leah S VandenBosch; Takeshi Yoshimatsu; Rachel O Wong; Fred Rieke; Thomas A Reh
Journal:  Nature       Date:  2017-07-26       Impact factor: 49.962

Review 8.  Mechanisms and models of somatic cell reprogramming.

Authors:  Yosef Buganim; Dina A Faddah; Rudolf Jaenisch
Journal:  Nat Rev Genet       Date:  2013-06       Impact factor: 53.242

Review 9.  A decade of transcription factor-mediated reprogramming to pluripotency.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Nat Rev Mol Cell Biol       Date:  2016-02-17       Impact factor: 94.444

10.  In vivo reprogramming of murine cardiac fibroblasts into induced cardiomyocytes.

Authors:  Li Qian; Yu Huang; C Ian Spencer; Amy Foley; Vasanth Vedantham; Lei Liu; Simon J Conway; Ji-dong Fu; Deepak Srivastava
Journal:  Nature       Date:  2012-05-31       Impact factor: 49.962

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  34 in total

1.  Mending broken hearts with the help of epigenetic remodellers.

Authors:  Kim Baumann
Journal:  Nat Rev Mol Cell Biol       Date:  2021-06       Impact factor: 94.444

2.  Taiji-reprogram: a framework to uncover cell-type specific regulators and predict cellular reprogramming cocktails.

Authors:  Jun Wang; Cong Liu; Yue Chen; Wei Wang
Journal:  NAR Genom Bioinform       Date:  2021-11-08

3.  RNA m1A methylation regulates glycolysis of cancer cells through modulating ATP5D.

Authors:  Yingmin Wu; Zhuojia Chen; Guoyou Xie; Haisheng Zhang; Zhaotong Wang; Jiawang Zhou; Feng Chen; Jiexin Li; Likun Chen; Hongxin Niu; Hongsheng Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-08       Impact factor: 12.779

4.  Nuclear Condensation of CDYL Links Histone Crotonylation and Cystogenesis in Autosomal Dominant Polycystic Kidney Disease.

Authors:  Lin Dang; Xinyi Cao; Tianye Zhang; Yongzhan Sun; Shanshan Tian; Tianyu Gong; Hui Xiong; Peipei Cao; Yuhao Li; Shengqiang Yu; Li Yang; Lirong Zhang; Tong Liu; Kai Zhang; Jing Liang; Yupeng Chen
Journal:  J Am Soc Nephrol       Date:  2022-08-02       Impact factor: 14.978

5.  Cross-lineage potential of Ascl1 uncovered by comparing diverse reprogramming regulatomes.

Authors:  Haofei Wang; Benjamin Keepers; Yunzhe Qian; Yifang Xie; Marazzano Colon; Jiandong Liu; Li Qian
Journal:  Cell Stem Cell       Date:  2022-10-06       Impact factor: 25.269

Review 6.  The Art of Reprogramming for Regenerative Medicine.

Authors:  Junqi Kuang; Tao Huang; Duanqing Pei
Journal:  Front Cell Dev Biol       Date:  2022-06-30

Review 7.  Direct reprogramming as a route to cardiac repair.

Authors:  Glynnis A Garry; Rhonda Bassel-Duby; Eric N Olson
Journal:  Semin Cell Dev Biol       Date:  2021-07-08       Impact factor: 7.727

Review 8.  Direct cardiac reprogramming comes of age: Recent advance and remaining challenges.

Authors:  Yifang Xie; Jiandong Liu; Li Qian
Journal:  Semin Cell Dev Biol       Date:  2021-07-23       Impact factor: 7.727

9.  Delineating chromatin accessibility re-patterning at single cell level during early stage of direct cardiac reprogramming.

Authors:  Haofei Wang; Yuchen Yang; Yunzhe Qian; Jiandong Liu; Li Qian
Journal:  J Mol Cell Cardiol       Date:  2021-09-10       Impact factor: 5.000

Review 10.  Bioengineering Technologies for Cardiac Regenerative Medicine.

Authors:  Mira Chingale; Dashuai Zhu; Ke Cheng; Ke Huang
Journal:  Front Bioeng Biotechnol       Date:  2021-06-03
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