Literature DB >> 26240361

SufB intein of Mycobacterium tuberculosis as a sensor for oxidative and nitrosative stresses.

Natalya I Topilina1, Cathleen M Green1, Pradeepa Jayachandran1, Danielle S Kelley2, Matthew J Stanger1, Carol Lyn Piazza1, Sasmita Nayak3, Marlene Belfort4.   

Abstract

Inteins are mobile genetic elements that self-splice at the protein level. Mycobacteria have inteins inserted into several important genes, including those corresponding to the iron-sulfur cluster assembly protein SufB. Curiously, the SufB inteins are found primarily in mycobacterial species that are potential human pathogens. Here we discovered an exceptional sensitivity of Mycobacterium tuberculosis SufB intein splicing to oxidative and nitrosative stresses when expressed in Escherichia coli. This effect results from predisposition of the intein's catalytic cysteine residues to oxidative and nitrosative modifications. Experiments with a fluorescent reporter system revealed that reactive oxygen species and reactive nitrogen species inhibit SufB extein ligation by forcing either precursor accumulation or N-terminal cleavage. We propose that splicing inhibition is an immediate, posttranslational regulatory response that can be either reversible, by inducing precursor accumulation, or irreversible, by inducing N-terminal cleavage, which may potentially channel mycobacteria into dormancy under extreme oxidative and nitrosative stresses.

Entities:  

Keywords:  [Fe-S] biogenesis; controllable protein splicing; cysteine chemistry; intein function; posttranslational regulation

Mesh:

Substances:

Year:  2015        PMID: 26240361      PMCID: PMC4547236          DOI: 10.1073/pnas.1512777112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

Review 1.  Direct and indirect detection methods for the analysis of S-nitrosylated peptides and proteins.

Authors:  Federico Torta; Lisa Elviri; Angela Bachi
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

2.  Spontaneous proton transfer to a conserved intein residue determines on-pathway protein splicing.

Authors:  Brian Pereira; Philip T Shemella; Gil Amitai; Georges Belfort; Saroj K Nayak; Marlene Belfort
Journal:  J Mol Biol       Date:  2010-12-23       Impact factor: 5.469

3.  Protein structure prediction on the Web: a case study using the Phyre server.

Authors:  Lawrence A Kelley; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

4.  Response of Mycobacterium tuberculosis to reactive oxygen and nitrogen intermediates.

Authors:  T R Garbe; N S Hibler; V Deretic
Journal:  Mol Med       Date:  1996-01       Impact factor: 6.354

5.  Modulation of intein activity by its neighboring extein substrates.

Authors:  Gil Amitai; Brian P Callahan; Matt J Stanger; Georges Belfort; Marlene Belfort
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-17       Impact factor: 11.205

6.  Membrane topology and mutational analysis of Mycobacterium tuberculosis VKOR, a protein involved in disulfide bond formation and a homologue of human vitamin K epoxide reductase.

Authors:  Xiaoyun Wang; Rachel J Dutton; Jon Beckwith; Dana Boyd
Journal:  Antioxid Redox Signal       Date:  2011-02-18       Impact factor: 8.401

7.  Jalview Version 2--a multiple sequence alignment editor and analysis workbench.

Authors:  Andrew M Waterhouse; James B Procter; David M A Martin; Michèle Clamp; Geoffrey J Barton
Journal:  Bioinformatics       Date:  2009-01-16       Impact factor: 6.937

8.  A suf operon requirement for Fe-S cluster assembly during iron starvation in Escherichia coli.

Authors:  F Wayne Outten; Ouliana Djaman; Gisela Storz
Journal:  Mol Microbiol       Date:  2004-05       Impact factor: 3.501

9.  Molecular dynamism of Fe-S cluster biosynthesis implicated by the structure of the SufC(2)-SufD(2) complex.

Authors:  Kei Wada; Norika Sumi; Rina Nagai; Kenji Iwasaki; Takayuki Sato; Kei Suzuki; Yuko Hasegawa; Shintaro Kitaoka; Yoshiko Minami; F Wayne Outten; Yasuhiro Takahashi; Keiichi Fukuyama
Journal:  J Mol Biol       Date:  2009-01-31       Impact factor: 5.469

10.  Post-translational environmental switch of RadA activity by extein-intein interactions in protein splicing.

Authors:  Natalya I Topilina; Olga Novikova; Matthew Stanger; Nilesh K Banavali; Marlene Belfort
Journal:  Nucleic Acids Res       Date:  2015-06-22       Impact factor: 16.971

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  32 in total

1.  Impact of a homing intein on recombination frequency and organismal fitness.

Authors:  Adit Naor; Neta Altman-Price; Shannon M Soucy; Anna G Green; Yulia Mitiagin; Israela Turgeman-Grott; Noam Davidovich; Johann Peter Gogarten; Uri Gophna
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-26       Impact factor: 11.205

2.  Protein Splicing Activity of the Haloferax volcanii PolB-c Intein Is Sensitive to Homing Endonuclease Domain Mutations.

Authors:  Shachar Robinzon; Alexandra R Cawood; Mercedes A Ruiz; Uri Gophna; Neta Altman-Price; Kenneth V Mills
Journal:  Biochemistry       Date:  2020-09-02       Impact factor: 3.162

Review 3.  Mobile self-splicing introns and inteins as environmental sensors.

Authors:  Marlene Belfort
Journal:  Curr Opin Microbiol       Date:  2017-05-05       Impact factor: 7.934

4.  Conditional Alternative Protein Splicing Promoted by Inteins from Haloquadratum walsbyi.

Authors:  Vaishnavi R Yalala; Abigeal K Lynch; Kenneth V Mills
Journal:  Biochemistry       Date:  2022-01-24       Impact factor: 3.162

5.  Monitoring Protein Splicing Using In-gel Fluorescence Immediately Following SDS-PAGE.

Authors:  Joel Weinberger Ii; Christopher W Lennon
Journal:  Bio Protoc       Date:  2021-08-20

6.  A Program for Iron Economy during Deficiency Targets Specific Fe Proteins.

Authors:  Laura J Hantzis; Gretchen E Kroh; Courtney E Jahn; Michael Cantrell; Graham Peers; Marinus Pilon; Karl Ravet
Journal:  Plant Physiol       Date:  2017-11-17       Impact factor: 8.340

7.  Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins.

Authors:  Hideo Iwaï; Kornelia M Mikula; Jesper S Oeemig; Dongwen Zhou; Mi Li; Alexander Wlodawer
Journal:  J Mol Biol       Date:  2017-10-18       Impact factor: 5.469

8.  Mobile genetic elements: in silico, in vitro, in vivo.

Authors:  Irina R Arkhipova; Phoebe A Rice
Journal:  Mol Ecol       Date:  2016-02-15       Impact factor: 6.185

9.  Construction and Quantitation of a Selectable Protein Splicing Sensor Using Gibson Assembly and Spot Titers.

Authors:  Daniel Woods; Danielle S LeSassier; Ikechukwu Egbunam; Christopher W Lennon
Journal:  Curr Protoc       Date:  2021-03

10.  Transcriptomics Analysis Uncovers Transient Ceftazidime Tolerance in Burkholderia Biofilms.

Authors:  Supaksorn Chattagul; Mohd M Khan; Alison J Scott; Aleksandra Nita-Lazar; Robert K Ernst; David R Goodlett; Rasana W Sermswan
Journal:  ACS Infect Dis       Date:  2021-06-17       Impact factor: 5.578

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