Literature DB >> 34541040

Monitoring Protein Splicing Using In-gel Fluorescence Immediately Following SDS-PAGE.

Joel Weinberger Ii1, Christopher W Lennon1.   

Abstract

Inteins garner significant interest from both basic and applied researchers due to their unique catalytic abilities. Herein, we describe a protocol for accurately monitoring protein splicing without purification using in-gel fluorescence immediately following Tris-Glycine SDS-PAGE. Following expression in Escherichia coli, cells are lysed by sonication, cell supernatants are separated using Tris-Glycine SDS-PAGE, and superfolder GFP (sfGFP) fluorescence is directly visualized within gels. This method is rapid, with sfGFP immediately imaged following SDS-PAGE without staining. Further, sfGFP can be specifically detected in complex samples such as E. coli cell supernatants, proteins run at expected masses, and all steps can be performed at ambient temperature. This strategy is broadly applicable beyond the study of protein splicing and can be used for sensitive and specific visualization of superfolder sfGFP-tagged proteins in-gel.
Copyright © 2021 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Green fluorescent protein; In-gel fluorescence; Intein; Protein splicing

Year:  2021        PMID: 34541040      PMCID: PMC8413630          DOI: 10.21769/BioProtoc.4121

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  12 in total

1.  SufB intein of Mycobacterium tuberculosis as a sensor for oxidative and nitrosative stresses.

Authors:  Natalya I Topilina; Cathleen M Green; Pradeepa Jayachandran; Danielle S Kelley; Matthew J Stanger; Carol Lyn Piazza; Sasmita Nayak; Marlene Belfort
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-03       Impact factor: 11.205

2.  Inteins.

Authors:  Christopher W Lennon; Marlene Belfort
Journal:  Curr Biol       Date:  2017-03-20       Impact factor: 10.834

3.  A method for in-gel fluorescent visualization of proteins after native and sodium dodecyl sulfate polyacrylamide gel electrophoresis.

Authors:  Jelena Bogdanović Pristov; Miloš Opačić; Milena Dimitrijević; Nikolina Babić; Ivan Spasojević
Journal:  Anal Biochem       Date:  2015-04-08       Impact factor: 3.365

4.  Green fluorescent protein-based expression screening of membrane proteins in Escherichia coli.

Authors:  Louise E Bird; Heather Rada; Anil Verma; Raphael Gasper; James Birch; Matthew Jennions; Jan Lӧwe; Isabel Moraes; Raymond J Owens
Journal:  J Vis Exp       Date:  2015-01-06       Impact factor: 1.355

5.  Mycobacteriophages as Incubators for Intein Dissemination and Evolution.

Authors:  Danielle S Kelley; Christopher W Lennon; Marlene Belfort; Olga Novikova
Journal:  mBio       Date:  2016-10-04       Impact factor: 7.867

6.  Conditional DnaB Protein Splicing Is Reversibly Inhibited by Zinc in Mycobacteria.

Authors:  Daniel Woods; Sweta Vangaveti; Ikechukwu Egbanum; Allison M Sweeney; Zhong Li; Valjean Bacot-Davis; Danielle S LeSassier; Matthew Stanger; Gabrielle E Hardison; Hongmin Li; Marlene Belfort; Christopher W Lennon
Journal:  mBio       Date:  2020-07-14       Impact factor: 7.867

7.  Spliceosomal Prp8 intein at the crossroads of protein and RNA splicing.

Authors:  Cathleen M Green; Zhong Li; Aaron D Smith; Olga Novikova; Valjean R Bacot-Davis; Fengshan Gao; Saiyang Hu; Nilesh K Banavali; Dennis J Thiele; Hongmin Li; Marlene Belfort
Journal:  PLoS Biol       Date:  2019-10-10       Impact factor: 8.029

Review 8.  Protein splicing: how inteins escape from precursor proteins.

Authors:  Kenneth V Mills; Margaret A Johnson; Francine B Perler
Journal:  J Biol Chem       Date:  2014-04-02       Impact factor: 5.157

9.  Conditional Protein Splicing Switch in Hyperthermophiles through an Intein-Extein Partnership.

Authors:  Christopher W Lennon; Matthew Stanger; Nilesh K Banavali; Marlene Belfort
Journal:  mBio       Date:  2018-01-30       Impact factor: 7.867

10.  Mycobacterial DnaB helicase intein as oxidative stress sensor.

Authors:  Danielle S Kelley; Christopher W Lennon; Zhong Li; Michael R Miller; Nilesh K Banavali; Hongmin Li; Marlene Belfort
Journal:  Nat Commun       Date:  2018-10-19       Impact factor: 14.919

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  1 in total

1.  Reactive Chlorine Species Reversibly Inhibit DnaB Protein Splicing in Mycobacteria.

Authors:  Christopher W Lennon; Daniel Wahl; J R Goetz; Joel Weinberger
Journal:  Microbiol Spectr       Date:  2021-09-22
  1 in total

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