Literature DB >> 26139131

Imaging stress.

Shlomi Brielle1,2, Rotem Gura3, Daniel Kaganovich4.   

Abstract

Recent innovations in cell biology and imaging approaches are changing the way we study cellular stress, protein misfolding, and aggregation. Studies have begun to show that stress responses are even more variegated and dynamic than previously thought, encompassing nano-scale reorganization of cytosolic machinery that occurs almost instantaneously, much faster than transcriptional responses. Moreover, protein and mRNA quality control is often organized into highly dynamic macromolecular assemblies, or dynamic droplets, which could easily be mistaken for dysfunctional "aggregates," but which are, in fact, regulated functional compartments. The nano-scale architecture of stress-response ranges from diffraction-limited structures like stress granules, P-bodies, and stress foci to slightly larger quality control inclusions like juxta nuclear quality control compartment (JUNQ) and insoluble protein deposit compartment (IPOD), as well as others. Examining the biochemical and physical properties of these dynamic structures necessitates live cell imaging at high spatial and temporal resolution, and techniques to make quantitative measurements with respect to movement, localization, and mobility. Hence, it is important to note some of the most recent observations, while casting an eye towards new imaging approaches that offer the possibility of collecting entirely new kinds of data from living cells.

Entities:  

Keywords:  Aggregation; Chaperone; Dynamic droplets; FLIP; FRAP; IPOD; Inclusion; JUNQ; Misfolded protein; P-bodies; PhoC; Stress foci; Stress granules

Mesh:

Year:  2015        PMID: 26139131      PMCID: PMC4595435          DOI: 10.1007/s12192-015-0615-y

Source DB:  PubMed          Journal:  Cell Stress Chaperones        ISSN: 1355-8145            Impact factor:   3.667


  71 in total

1.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

Review 2.  Getting RNA and protein in phase.

Authors:  Stephanie C Weber; Clifford P Brangwynne
Journal:  Cell       Date:  2012-06-08       Impact factor: 41.582

3.  Fluctuation correlation spectroscopy with a laser-scanning microscope: exploiting the hidden time structure.

Authors:  Michelle A Digman; Parijat Sengupta; Paul W Wiseman; Claire M Brown; Alan R Horwitz; Enrico Gratton
Journal:  Biophys J       Date:  2005-03-25       Impact factor: 4.033

4.  Particle image correlation spectroscopy (PICS): retrieving nanometer-scale correlations from high-density single-molecule position data.

Authors:  S Semrau; T Schmidt
Journal:  Biophys J       Date:  2006-11-03       Impact factor: 4.033

Review 5.  Liquid-liquid phase separation in biology.

Authors:  Anthony A Hyman; Christoph A Weber; Frank Jülicher
Journal:  Annu Rev Cell Dev Biol       Date:  2014       Impact factor: 13.827

6.  Polyglutamine shows a urea-like affinity for unfolded cytosolic protein.

Authors:  Jeremy L England; Daniel Kaganovich
Journal:  FEBS Lett       Date:  2010-12-19       Impact factor: 4.124

Review 7.  Opinion: What is the role of protein aggregation in neurodegeneration?

Authors:  Christopher A Ross; Michelle A Poirier
Journal:  Nat Rev Mol Cell Biol       Date:  2005-11       Impact factor: 94.444

8.  Stressful initiations.

Authors:  Paul Anderson; Nancy Kedersha
Journal:  J Cell Sci       Date:  2002-08-15       Impact factor: 5.285

9.  Construction of synthetic nucleoli in human cells reveals how a major functional nuclear domain is formed and propagated through cell division.

Authors:  Alice Grob; Christine Colleran; Brian McStay
Journal:  Genes Dev       Date:  2014-01-21       Impact factor: 11.361

10.  Cmr1/WDR76 defines a nuclear genotoxic stress body linking genome integrity and protein quality control.

Authors:  Irene Gallina; Camilla Colding; Peter Henriksen; Petra Beli; Kyosuke Nakamura; Judith Offman; David P Mathiasen; Sonia Silva; Eva Hoffmann; Anja Groth; Chunaram Choudhary; Michael Lisby
Journal:  Nat Commun       Date:  2015-03-30       Impact factor: 14.919

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  3 in total

Review 1.  Mitochondrial dysfunction in protein conformational disorders.

Authors:  Shlomi Brielle; Daniel Kaganovich
Journal:  J Genet       Date:  2018-07       Impact factor: 1.166

2.  Insights into the Role of P-Bodies and Stress Granules in Protein Quality Control.

Authors:  Regina Nostramo; Siyuan Xing; Bo Zhang; Paul K Herman
Journal:  Genetics       Date:  2019-07-08       Impact factor: 4.562

3.  Intersection of two key signal integrators in the cell: activator of G-protein signaling 3 and dishevelled-2.

Authors:  Ali Vural; Stephen M Lanier
Journal:  J Cell Sci       Date:  2020-09-04       Impact factor: 5.285

  3 in total

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