Literature DB >> 26033759

Error-Prone Repair of DNA Double-Strand Breaks.

Kasey Rodgers1, Mitch McVey1.   

Abstract

Preserving the integrity of the DNA double helix is crucial for the maintenance of genomic stability. Therefore, DNA double-strand breaks represent a serious threat to cells. In this review, we describe the two major strategies used to repair double strand breaks: non-homologous end joining and homologous recombination, emphasizing the mutagenic aspects of each. We focus on emerging evidence that homologous recombination, long thought to be an error-free repair process, can in fact be highly mutagenic, particularly in contexts requiring large amounts of DNA synthesis. Recent investigations have begun to illuminate the molecular mechanisms by which error-prone double-strand break repair can create major genomic changes, such as translocations and complex chromosome rearrangements. We highlight these studies and discuss proposed models that may explain some of the more extreme genetic changes observed in human cancers and congenital disorders.
© 2015 Wiley Periodicals, Inc.

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Year:  2016        PMID: 26033759      PMCID: PMC4586358          DOI: 10.1002/jcp.25053

Source DB:  PubMed          Journal:  J Cell Physiol        ISSN: 0021-9541            Impact factor:   6.384


  87 in total

1.  A gradient of template dependence defines distinct biological roles for family X polymerases in nonhomologous end joining.

Authors:  Stephanie A Nick McElhinny; Jody M Havener; Miguel Garcia-Diaz; Raquel Juárez; Katarzyna Bebenek; Barbara L Kee; Luis Blanco; Thomas A Kunkel; Dale A Ramsden
Journal:  Mol Cell       Date:  2005-08-05       Impact factor: 17.970

2.  Break-induced replication occurs by conservative DNA synthesis.

Authors:  Roberto A Donnianni; Lorraine S Symington
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-29       Impact factor: 11.205

Review 3.  Complex human chromosomal and genomic rearrangements.

Authors:  Feng Zhang; Claudia M B Carvalho; James R Lupski
Journal:  Trends Genet       Date:  2009-06-25       Impact factor: 11.639

4.  Frequent Interchromosomal Template Switches during Gene Conversion in S. cerevisiae.

Authors:  Olga Tsaponina; James E Haber
Journal:  Mol Cell       Date:  2014-07-24       Impact factor: 17.970

5.  DNA synthesis errors associated with double-strand-break repair.

Authors:  J N Strathern; B K Shafer; C B McGill
Journal:  Genetics       Date:  1995-07       Impact factor: 4.562

Review 6.  Sources of DNA double-strand breaks and models of recombinational DNA repair.

Authors:  Anuja Mehta; James E Haber
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-08-07       Impact factor: 10.005

7.  Break-induced replication is highly inaccurate.

Authors:  Angela Deem; Andrea Keszthelyi; Tiffany Blackgrove; Alexandra Vayl; Barbara Coffey; Ruchi Mathur; Andrei Chabes; Anna Malkova
Journal:  PLoS Biol       Date:  2011-02-15       Impact factor: 8.029

8.  Mechanism of microhomology-mediated end-joining promoted by human DNA polymerase θ.

Authors:  Tatiana Kent; Gurushankar Chandramouly; Shane Michael McDevitt; Ahmet Y Ozdemir; Richard T Pomerantz
Journal:  Nat Struct Mol Biol       Date:  2015-02-02       Impact factor: 15.369

9.  Chromosome rearrangements via template switching between diverged repeated sequences.

Authors:  Ranjith P Anand; Olga Tsaponina; Patricia W Greenwell; Cheng-Sheng Lee; Wei Du; Thomas D Petes; James E Haber
Journal:  Genes Dev       Date:  2014-11-01       Impact factor: 11.361

10.  DNA ligases I and III cooperate in alternative non-homologous end-joining in vertebrates.

Authors:  Katja Paul; Minli Wang; Emil Mladenov; Alena Bencsik-Theilen; Theresa Bednar; Wenqi Wu; Hiroshi Arakawa; George Iliakis
Journal:  PLoS One       Date:  2013-03-28       Impact factor: 3.240

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  122 in total

1.  Durable Response of Enzalutamide-resistant Prostate Cancer to Supraphysiological Testosterone Is Associated with a Multifaceted Growth Suppression and Impaired DNA Damage Response Transcriptomic Program in Patient-derived Xenografts.

Authors:  Hung-Ming Lam; Holly M Nguyen; Mark P Labrecque; Lisha G Brown; Ilsa M Coleman; Roman Gulati; Bryce Lakely; Daniel Sondheim; Payel Chatterjee; Brett T Marck; Alvin M Matsumoto; Elahe A Mostaghel; Michael T Schweizer; Peter S Nelson; Eva Corey
Journal:  Eur Urol       Date:  2019-06-19       Impact factor: 20.096

Review 2.  Repair of a Site-Specific DNA Cleavage: Old-School Lessons for Cas9-Mediated Gene Editing.

Authors:  Danielle N Gallagher; James E Haber
Journal:  ACS Chem Biol       Date:  2017-11-14       Impact factor: 5.100

Review 3.  DNA Repair in Drosophila: Mutagens, Models, and Missing Genes.

Authors:  Jeff Sekelsky
Journal:  Genetics       Date:  2017-02       Impact factor: 4.562

Review 4.  Control of gene editing by manipulation of DNA repair mechanisms.

Authors:  Eric Danner; Sanum Bashir; Saniye Yumlu; Wolfgang Wurst; Benedikt Wefers; Ralf Kühn
Journal:  Mamm Genome       Date:  2017-04-03       Impact factor: 2.957

5.  Causes and evolutionary consequences of primordial germ-cell specification mode in metazoans.

Authors:  Carrie A Whittle; Cassandra G Extavour
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-06       Impact factor: 11.205

6.  Somatic recombination in adult tissues: What is there to learn?

Authors:  Katarzyna Siudeja; Allison J Bardin
Journal:  Fly (Austin)       Date:  2016-11-11       Impact factor: 2.160

Review 7.  Break induced replication in eukaryotes: mechanisms, functions, and consequences.

Authors:  Cynthia J Sakofsky; Anna Malkova
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-04-21       Impact factor: 8.250

Review 8.  Consider the workhorse: Nonhomologous end-joining in budding yeast.

Authors:  Charlene H Emerson; Alison A Bertuch
Journal:  Biochem Cell Biol       Date:  2016-03-31       Impact factor: 3.626

9.  Atypical chromosome 22q11.2 deletions are complex rearrangements and have different mechanistic origins.

Authors:  Lisanne Vervoort; Wolfram Demaerel; Laura Y Rengifo; Adrian Odrzywolski; Elfi Vergaelen; Matthew S Hestand; Jeroen Breckpot; Koen Devriendt; Ann Swillen; Donna M McDonald-McGinn; Ania M Fiksinski; Janneke R Zinkstok; Bernice E Morrow; Tracy Heung; Jacob A S Vorstman; Anne S Bassett; Eva W C Chow; Vandana Shashi; Joris R Vermeesch
Journal:  Hum Mol Genet       Date:  2019-11-15       Impact factor: 6.150

Review 10.  On the wrong DNA track: Molecular mechanisms of repeat-mediated genome instability.

Authors:  Alexandra N Khristich; Sergei M Mirkin
Journal:  J Biol Chem       Date:  2020-02-14       Impact factor: 5.157

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