| Literature DB >> 25991444 |
Rob Kok1, Jos A H M Verbeek2, Babs Faber1, Frank J H van Dijk1, Jan L Hoving1.
Abstract
OBJECTIVE: Searching the medical literature for evidence on prognosis is an important aspect of evidence-based disability evaluation. To facilitate this, we aimed to develop and evaluate a comprehensive and efficient search strategy in PubMed, to be used by either researchers or practitioners and that will identify articles on the prognosis of work disability.Entities:
Keywords: EPIDEMIOLOGY; OCCUPATIONAL & INDUSTRIAL MEDICINE; PUBLIC HEALTH
Mesh:
Year: 2015 PMID: 25991444 PMCID: PMC4442145 DOI: 10.1136/bmjopen-2014-006315
Source DB: PubMed Journal: BMJ Open ISSN: 2044-6055 Impact factor: 2.692
Figure 1flow chart of articles and search terms.
Formulae for the calculation of operating characteristics for a search filter for locating studies in MEDLINE
| Relevant articles | Non-relevant articles | Total | |
|---|---|---|---|
| Search term + | a (true positive) | b (false positive) | a+b |
| Search term − | c (false negative) | d (true negative) | c+d |
| Total | a+c | b+d | a+b+c+d |
Comprehensiveness=Sensitivity=Recall=a/(a+c).
Efficiency (=Precision=a/(a+b)), expressed more user-friendly as Number Needed to Read (=1/precision).
Specificity=d/(b+d).
Accuracy=(a+d)/(a+b+c+d).
Total number of articles and articles included in the reference set from 10 selected journals in the publication years 2000–2009. In parentheses the percentages
| Name journal | Total articles (%) | Relevant articles (%) |
|---|---|---|
| 679 (1) | 6 (2.7) | |
| 328 (0.5) | 10 (4.4) | |
| 1654 (2.5) | 4 (1.8) | |
| 6092 (9.3) | 167 (74.2) | |
| 6200 (9.4) | 12 (5.3) | |
| 7804 (11.9) | 13 (5.8) | |
| 742 (1.1) | 0 (0) | |
| 11 541 (17.6) | 8 (3.6) | |
| 8489 (12.9) | 0 (0) | |
| 22 163 (33.7) | 5 (2.2) | |
| Total | 65 692 (100) | 225 (100) |
Comparison of search filter performance scores on comprehensiveness and efficiency expressed more user-friendly as the Number Needed to Read (NNR=1/precision), related to the capability to identify relevant articles on prognosis of work disability
| Comprehensiveness (%) (95% CI) | Efficiency (NNR) (95% CI) | |
|---|---|---|
| Yale filter only | 100 | 103 (91 to 119) |
| Work disability Prognosis filter (R) | 90 (86 to 94) | 20 (17 to 23) |
| Work disability Prognosis filter (P) | 68 (61 to 74) | 13 (11 to 15) |
| Filter Haafkens | 35 (28 to 41) | 19 (16 to 25) |
| Filter Verbeek | 41 (35 to 48) | 57 (47 to 73) |
| Filter Verbeek | 16 (11 to 21) | 39 (29 to 58) |
| Filter Gehanno | 31 (25 to 37) | 11 (9 to 14) |
| Filter Gehanno | 17 (12 to 22) | 5 (4 to 8) |
A research (R) and practice (P) search filter on prognosis of work disability are compared with five other occupational health search filters developed by Haafkens, Verbeek (work component only of R and P) and Gehanno (R and P). All filters were applied in combination with the Yale methodological research filter for prognosis and natural history.
Number of (relevant) hits on prognosis of work disability in PubMed in a restricted time period in three diseases: rheumatoid arthritis, major depression and cystic fibrosis (using MeSH terms)
| Diseases selected by MeSH terms | Rheumatoid arthritis | Major depression | Cystic fibrosis |
|---|---|---|---|
| Number of hits in PubMed (restricted time period) | 624 (1 month) | 473 (2 months) | 682 (7 months) |
| Number of relevant hits | 1 | 2 | 2 |
| Number of hits by adding Yale filter (total number of articles found) | 1 (262) | 2 (260) | 2 (265) |
| Comprhensiveness (CI) | 1.0 (NA) | 1.0 (NA) | 1.0 (NA) |
| Efficiency (CI) | 262 (5 to 11 111) | 130 (36 to 1075) | 133 (4 to 1099) |
| Number of hits by adding Yale filter in combination with WDP-R filter (total number of articles found) | 1 (72) | 2 (80) | 2 (42) |
| Comprehensiveness (CI) | 1.0 (NA | 1.0 (NA) | 1.0 (NA) |
| Efficiency (CI) | 72 (1 to 3333) | 40 (1 to 133) | 21 (6 to 172) |
| Number of hits by adding Yale filter in combination with WDP-P filter (total number of articles found) | 1 (44) | 0 (36) | 1 (20) |
| Comprehnsiveness (CI) | 1.0 (NA) | 0 (NA) | 0.50 (0.01 to 0.99) |
| Efficiency (CI) | 44 (15 to 47) | NA | 20 (7 to 22) |
For each search filter or combination of filters comprehensiveness (sensitivity) and efficiency, expressed more user-friendly as the Number Needed to Read (NNR=1/precision), were calcualted. In parentheses the 95% CI.
NA, not applicable; WDP-P, Work Disability Prognosis—Practice filter; WDP-R, Work Disability Prognosis—Research filter.