| Literature DB >> 25969530 |
Tara C Mills1, Stephen Chapman1, Paula Hutton2, Anthony C Gordon3, Julian Bion4, Jean-Daniel Chiche5, Paul A H Holloway3, Frank Stüber6, Chris S Garrard2, Charles J Hinds7, Adrian V S Hill1, Anna Rautanen1.
Abstract
BACKGROUND: Sepsis is an increasingly common condition, which continues to be associated with unacceptably high mortality. A large number of association studies have investigated susceptibility to, or mortality from, sepsis for variants in the functionally important immune-related gene MBL2. These studies have largely been underpowered and contradictory.Entities:
Keywords: MBL; association study; genetics; mannose-binding lectin; sepsis
Mesh:
Substances:
Year: 2015 PMID: 25969530 PMCID: PMC4530723 DOI: 10.1093/cid/civ378
Source DB: PubMed Journal: Clin Infect Dis ISSN: 1058-4838 Impact factor: 9.079
Demographic Data for Patients and Controls
| Sepsis Cases | Control Samples | |
|---|---|---|
| N | 1839 | 477 |
| N deaths at 28 d | 357 (19.4%) | 0 |
| Males | 1069 (58.1%) | 189 (39.6%) |
| Mean age (standard deviation) | 64.2 (15.3) | 49.2 (18.7) |
| N CAP | 983 (53.5%) | NA |
| N peritonitis | 856 (46.5%) | NA |
| APACHE II score; median (range) | 17 (2–44) | NA |
| 245 (13.3%) | NA | |
| Respiratory disease | 642 (34.9%) | NA |
| COPD | 296 (16.1%) | 10 (2.1%) |
| Asthma | 140 (7.6%) | 59 (12.4%) |
| United Kingdom | 831 | 447 |
| Spain | 228 | NA |
| Belgium | 155 | NA |
| Germany | 153 | NA |
| Czech Republic | 109 | NA |
| Italy | 97 | NA |
| Poland | 92 | NA |
| France | 59 | NA |
| Ireland | 54 | NA |
| Estonia | 22 | NA |
| Serbia and Montenegro | 21 | NA |
| Greece | 5 | NA |
| Croatia | 5 | NA |
| Hungary | 5 | NA |
| Israel | 2 | NA |
| Netherlands | 1 | NA |
Abbreviations: APACHE, Acute Physiology, Age, Chronic Health Evaluation; CAP, community-acquired pneumonia; COPD, chronic obstructive pulmonary disease; NA, not applicable.
MBL2 Allele Frequencies in the Study Reported Here and 2 Large Published European Studies
| Sepsis Cases | UK Controls | Dahl et al [ | Garcia-Laorden et al [ | |||
|---|---|---|---|---|---|---|
| N samples | ||||||
| Country of samples | Europe-wide | UK | Denmark | Spain | Spain | Spain |
| B allele frequency | 0.149 | 0.151 | 0.145 | 0.159 | 0.139 | 0.142 |
| C allele frequency | 0.019 | 0.024 | 0.017 | 0.022 | 0.031 | 0.029 |
| D allele frequency | 0.070 | 0.070 | 0.076 | 0.047 | 0.045 | 0.059 |
| X allele frequency | 0.219 | 0.203 | Not genotyped | 0.194 | 0.227 | 0.206 |
MBL Genotypic Functional Status and the Combined Genotype Distribution (−221 Promoter Single Nucleotide Polymorphism [SNP] and 3 Functional Exonic SNPs) Among Survivors and Deaths in 28-day and 6-month Survival Analyses, and in 28-day Pneumococcal Survival Analysis
| MBL Functional Status | Genotypes | CAP and Peritonitis Sepsis 28 d Deaths | CAP and Peritonitis Sepsis 28 d Survivors | CAP Sepsis 28 day Deaths | CAP Sepsis 28 d Survivors | Peritonitis Sepsis 28 d Deaths | Peritonitis Sepsis 28 d Survivors | Pneumococcal Sepsis 28 d Deaths | Pneumococcal Sepsis 28 d Survivors | Sepsis 6 mo Deaths | Sepsis 6 mo Survivors |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MBL Deficient | XO/O (%) | 1 (0.3) | 1 (0.1) | 0 | 1 (0.1) | 1 (0.6) | 0 | 0 | 0 | 0 | 1 (0.1) |
| O/O (%) | 19 (5.3) | 81 (5.5) | 6 (3.4) | 43 (5.3) | 13 (7.3) | 38 (5.6) | 2 (4.4) | 11 (5.5) | 12 (4.5) | 35 (5.0) | |
| XA/O (%) | 30 (8.4) | 162 (10.9) | 18 (10.1) | 84 (10.4) | 12 (6.7) | 78 (11.5) | 5 (11.1) | 24 (12.0) | 28 (10.6) | 73 (10.4) | |
| MBL Sufficient | XA/XA (%) | 17 (4.8) | 75 (5.0) | 6 (3.4) | 40 (5.0) | 11 (6.1) | 35 (5.2) | 1 (2.2) | 15 (7.5) | 10 (3.8) | 34 (4.8) |
| XA/YA (%) | 74 (20.7) | 355 (24.0) | 42 (23.6) | 198 (24.6) | 32 (17.9) | 157 (23.2) | 12 (26.7) | 40 (20.0) | 67 (25.3) | 166 (23.6) | |
| YA/O (%) | 98 (27.4) | 381 (25.7) | 48 (27.0) | 211 (26.2) | 50 (27.9) | 170 (25.1) | 9 (20.0) | 57 (28.5) | 68 (25.7) | 189 (26.8) | |
| YA/YA (%) | 118 (33.1) | 427 (28.8) | 58 (32.6) | 228 (28.3) | 60 (33.5) | 199 (29.4) | 16 (35.6) | 53 (26.5) | 80 (30.2) | 206 (29.3) | |
| Overall Total | 357 | 1482 | 178 | 805 | 179 | 677 | 45 | 200 | 265 | 704 | |
| .169 | .198 | .585 | .643 | .229 | |||||||
Percentages of genotype distributions in each patient group are shown in brackets. Analyses were also performed for 3 subgroups of CAP and peritonitis patients; those under 70, those under 60, and those from the UK. None of the associations in these subgroups were significant (P-values .671, .235 and .870 respectively). The 2 detected XO/O genotypes both included one polymorphism in the −221 promoter, and B and D exonic SNPs, and were confirmed by sequencing (Supplementary Figure 2). Association tests (performed by logistic regression with age as a covariate in SPSS version 18) for deficient/sufficient status were nonsignificant for all subgroups.
Abbreviations: CAP, community-acquired pneumonia; MBL, mannose-binding lectin; SNP, single nucleotide polymorphism.
Exonic MBL2 Genotypes for the Main Survival Analysis Subgroups
| Sepsis 28 d Deaths | Sepsis 28 d Survivors | Sepsis 6 mo Deaths | Sepsis 6 mo Survivors | Pneumococcal CAP Sepsis 28 d Deaths | Pneumococcal CAP Sepsis 28 d Survivors | |
|---|---|---|---|---|---|---|
| A/A (%) | ||||||
| A/B (%) | 81 (22.7) | 336 (22.7) | 58 (21.9) | 164 (23.3) | 8 (17.8) | 46 (23) |
| A/C (%) | 10 (2.8) | 43 (2.9) | 6 (2.3) | 20 (2.8) | 0 | 8 (4.0) |
| A/D (%) | 37 (10.4) | 164 (11.1) | 32 (12.1) | 78 (11.1) | 6 (13.3) | 27 (13.5) |
| Sum A/O (%) | ||||||
| B/B (%) | 3 (0.8) | 39 (2.6) | 5 (1.9) | 17 (2.4) | 0 | 9 (4.5) |
| B/C (%) | 2 (0.6) | 5 (0.3) | 0 | 0 | 0 | 0 |
| B/D (%) | 9 (2.5) | 30 (2.0) | 4 (1.5) | 16 (2.3) | 2 (4.4) | 2 (1.0) |
| C/C (%) | 0 | 1 (0.1) | 0 | 1 (0.1) | 0 | 0 |
| C/D (%) | 3 (0.8) | 4 (0.3) | 2 (0.8) | 2 (0.3) | 0 | 0 |
| D/D (%) | 3 (0.8) | 3 (0.2) | 1 (0.4) | 0 | 0 | 0 |
| Sum O/O (%) | ||||||
| Total | 357 | 1482 | 265 | 704 | 45 | 200 |
| .937 | .697 | .488 | ||||
Percentages of genotype distributions are shown in brackets. In addition to the genotypic test, we have also performed the allelic, recessive, dominant and heterozygous tests for the AA, AO, OO genotypes, and all individual exonic SNPs (all P-values were nonsignificant following correction for multiple testing).
Abbreviations: CAP, community-acquired pneumonia; SNP, single nucleotide polymorphism.
MBL Genotypic Functional Status and the Combined Genotype Distribution (−221 Promoter Single Nucleotide Polymorphism [SNP] and 3 Functional Exonic SNPs) Among Cases and Controls From the United Kingdom in Community-Acquired Pneumonia (CAP) Sepsis and Pneumococcal CAP Sepsis Susceptibility Analyses
| MBL Functional Status | Genotypes | UK Controls | UK CAP Sepsis Cases | UK Pneumococcal CAP Sepsis Cases |
|---|---|---|---|---|
| MBL Deficient | XO/O (%) | 0 | 1 (0.2) | 0 |
| O/O (%) | 19 (4.0) | 27 (5.4) | 6 (6.3) | |
| XA/O (%) | 57 (11.9) | 45 (9.1) | 12 (12.6) | |
| MBL Sufficient | XA/XA (%) | 15 (3.1) | 22 (4.4) | 6 (6.3) |
| XA/YA (%) | 107 (22.4) | 128 (25.8) | 21 (22.1) | |
| YA/O (%) | 139 (29.1) | 128 (25.8) | 22 (23.2) | |
| YA/YA (%) | 140 (29.4) | 145 (29.2) | 28 (29.5) | |
| Overall Total | 477 | 496 | 95 | |
| NA | .343 | .587 | ||
Percentages of genotype distributions are shown in brackets. Both detected XO/O genotypes included one polymorphism in the −221 promoter, B and D exonic SNPs, and were confirmed by sequencing. Association tests (performed by logistic regression with age as a covariate in SPSS version 18) for deficient/sufficient genotypes for each set of cases compared to the controls were nonsignificant.
Abbreviations: CAP, community-acquired pneumonia; MBL, mannose-binding lectin; NA, not applicable; SNP, single nucleotide polymorphism.
Exonic MBL2 Genotypes for the Susceptibility Analysis Subgroups
| UK Controls | UK CAP Sepsis Cases | UK Pneumococcal CAP Sepsis Cases | |
|---|---|---|---|
| A/A (%) | |||
| A/B (%) | 122 (25.6) | 114 (23.0) | 23 (24.2) |
| A/C (%) | 20 (4.2) | 10 (2.0) | 2 (2.1) |
| A/D (%) | 54 (11.3) | 49 (9.9) | 9 (9.5) |
| Sum A/O (%) | |||
| B/B (%) | 6 (1.3) | 13 (2.6) | 5 (5.3) |
| B/C (%) | 2 (0.4) | 0 | 0 |
| B/D (%) | 8 (1.7) | 10 (2.0) | 1 (1.1) |
| C/C (%) | 0 | 0 | 0 |
| C/D (%) | 1 (0.2) | 4 (0.8) | 0 |
| D/D (%) | 2 (0.4) | 1 (0.2) | 0 |
| Sum O/O (%) | |||
| Total | 477 | 496 | 95 |
| NA | .170 | .530 |
Percentages of genotype distributions are shown in brackets. In addition to the genotypic test, we have also performed the allelic, recessive, dominant and heterozygous tests for the AA, AO, OO genotypes, and all individual exonic SNPs (All P-values were nonsignificant following correction for multiple testing).
Abbreviations: CAP, community-acquired pneumonia; NA, not applicable; SNP, single nucleotide polymorphism.