| Literature DB >> 20078874 |
Stephen J Chapman1, Fredrik O Vannberg, Chiea C Khor, Anna Rautanen, Nicholas A Maskell, Christopher W H Davies, Catrin E Moore, Nicholas P Day, Derrick W Crook, Robert J O Davies, Adrian V S Hill.
Abstract
BACKGROUND: The role of the innate immune protein mannose-binding lectin (MBL) in host defence against severe respiratory infection remains controversial. Thoracic empyema is a suppurative lung infection that arises as a major complication of pneumonia and is associated with a significant mortality. Although the pathogenesis of thoracic empyema is poorly understood, genetic susceptibility loci for this condition have recently been identified. The possible role of MBL genotypic deficiency in susceptibility to thoracic empyema has not previously been reported.Entities:
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Year: 2010 PMID: 20078874 PMCID: PMC2820469 DOI: 10.1186/1471-2350-11-5
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Primer sequences for MBL2 polymorphism genotyping
| Polymorphism | Primer sequence |
|---|---|
| -550 L/H | Forward - ACGTTGGATGGAGAAAATGCTTACCCAGGC |
| Reverse - ACGTTGGATGCAACCCAGCCCAGAATTAAC | |
| Extension - CTTACCCAGGCAAGCCTGT | |
| -221 Y/X | Forward - ACGTTGGATGACGGTCCCATTTGTTCTCAC |
| Reverse - ACGTTGGATGTTCATCTGTGCCTAGACACC | |
| Extension - CCCATTTGTTCTCACTGCCAC | |
| +4 P/Q | Forward - ACGTTGGATGACCCAGATTGTAGGACAGAG |
| Reverse - ACGTTGGATGGTGAGAAAACTCAGGGAAGG | |
| Extension - GTAGGACAGAGGGCATGCT | |
| MBL2 structural polymorphism sequencing | Forward - GCACCCAGATTGTAGGACAGAG |
| Reverse - CAGGCAGTTTCCTCTGGAAGG | |
MBLfunctional status (-221, 52, 54, and 57 polymorphisms) in individuals with thoracic empyema and controls.
| MBL functional status | Genotypes | Controls (%) | Empyema (%) |
|---|---|---|---|
| MBL Deficient | O O | 17 (7.6%) | 13 (7.8%) |
| XA O | 18 (8.0%) | 13 (7.8%) | |
| XA XA | 16 (7.1%) | 13 (7.8%) | |
| Total | 51 ( | 39 ( | |
| MBL Sufficient | XA YA | 53 (23.6%) | 35 (21.0%) |
| YA O | 49 (21.8%) | 33 (19.8%) | |
| YA YA | 72 (32.0%) | 60 (35.9%) | |
| Total | 174 ( | 128 ( | |
| Overall total | 225 | 167 | |
MBL2 L/H and P/Q polymorphisms in individuals with thoracic empyema and controls.
| Polymorphism | Genotypes | Controls (%) | Empyema (%) |
|---|---|---|---|
| -550 (H/L) | CC | 88 (45.1%) | 75 (51.4%) |
| CG | 85 (43.6%) | 52 (35.6%) | |
| GG | 22 (11.3%) | 19 (13.0%) | |
| 3 × 2 Chi square | 2.21 | ||
| 0.33 | |||
| +4 (P/Q) | CC | 116 (54.5%) | 82 (52.2%) |
| CT | 85 (39.9%) | 66 (42.0%) | |
| TT | 12 (5.6%) | 9 (5.7%) | |
| 3 × 2 Chi square | 0.19 | ||
| 0.91 | |||