| Literature DB >> 25913484 |
Roberto Marabini1, Bridget Carragher2, Shaoxia Chen3, James Chen4, Anchi Cheng2, Kenneth H Downing5, Joachim Frank6, Robert A Grassucci6, J Bernard Heymann7, Wen Jiang8, Slavica Jonic9, Hstau Y Liao6, Steven J Ludtke10, Shail Patwari11, Angela L Piotrowski11, Adrian Quintana12, Carlos O S Sorzano12, Henning Stahlberg13, Javier Vargas12, Neil R Voss11, Wah Chiu10, Jose M Carazo12.
Abstract
Image formation in bright field electron microscopy can be described with the help of the contrast transfer function (CTF). In this work the authors describe the "CTF Estimation Challenge", called by the Madrid Instruct Image Processing Center (I2PC) in collaboration with the National Center for Macromolecular Imaging (NCMI) at Houston. Correcting for the effects of the CTF requires accurate knowledge of the CTF parameters, but these have often been difficult to determine. In this challenge, researchers have had the opportunity to test their ability in estimating some of the key parameters of the electron microscope CTF on a large micrograph data set produced by well-known laboratories on a wide set of experimental conditions. This work presents the first analysis of the results of the CTF Estimation Challenge, including an assessment of the performance of the different software packages under different conditions, so as to identify those areas of research where further developments would be desirable in order to achieve high-resolution structural information.Entities:
Keywords: Benchmarking; Challenge; Contrast transfer function; Electron microscopy; High-resolution
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Year: 2015 PMID: 25913484 PMCID: PMC4672951 DOI: 10.1016/j.jsb.2015.04.003
Source DB: PubMed Journal: J Struct Biol ISSN: 1047-8477 Impact factor: 2.867