| Literature DB >> 33950394 |
Carlos Oscar S Sorzano1, Amaya Jiménez-Moreno2, David Maluenda2, Erney Ramírez-Aportela2, Marta Martínez2, Ana Cuervo2, Robert Melero2, Jose Javier Conesa2, Ruben Sánchez-García2, David Strelak2, Jiri Filipovic3, Estrella Fernández-Giménez2, Federico de Isidro-Gómez2, David Herreros2, Pablo Conesa2, Laura Del Caño2, Yunior Fonseca2, Jorge Jiménez de la Morena2, Jose Ramon Macías2, Patricia Losana2, Roberto Marabini4, Jose-Maria Carazo2.
Abstract
Cryo-electron microscopy has established as a mature structural biology technique to elucidate the three-dimensional structure of biological macromolecules. The Coulomb potential of the sample is imaged by an electron beam, and fast semi-conductor detectors produce movies of the sample under study. These movies have to be further processed by a whole pipeline of image-processing algorithms that produce the final structure of the macromolecule. In this chapter, we illustrate this whole processing pipeline putting in value the strength of "meta algorithms," which are the combination of several algorithms, each one with different mathematical rationale, in order to distinguish correctly from incorrectly estimated parameters. We show how this strategy leads to superior performance of the whole pipeline as well as more confident assessments about the reconstructed structures. The "meta algorithms" strategy is common to many fields and, in particular, it has provided excellent results in bioinformatics. We illustrate this combination using the workflow engine, Scipion.Keywords: Cryo-electron microscopy; Image processing; Scipion; Single particle
Year: 2021 PMID: 33950394 DOI: 10.1007/978-1-0716-1406-8_13
Source DB: PubMed Journal: Methods Mol Biol ISSN: 1064-3745