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Literature DB >> 26705325

Principles of cryo-EM single-particle image processing.

Abstract

Single-particle reconstruction is the process by which 3D density maps are obtained from a set of low-dose cryo-EM images of individual macromolecules. This review considers the fundamental principles of this process and the steps in the overall workflow for single-particle image processing. Also considered are the limits that image signal-to-noise ratio places on resolution and the distinguishing of heterogeneous particle populations.

Keywords: 3D reconstruction; SNR; noise

Mesh：

Substances：

Year: 2015 PMID： 26705325 PMCID： PMC4749045 DOI： 10.1093/jmicro/dfv370

Source DB: PubMed Journal: Microscopy (Oxf) ISSN： 2050-5698 Impact factor: 1.571

39 in total

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Authors: Nikolaus Grigorieff
Journal: J Struct Biol Date: 2006-06-02 Impact factor: 2.867

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Authors: Pawel A Penczek; Chao Yang; Joachim Frank; Christian M T Spahn
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Journal: Proc Natl Acad Sci U S A Date: 2014-10-20 Impact factor: 11.205

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Journal: Proc Natl Acad Sci U S A Date: 2014-11-24 Impact factor: 11.205

6. Rotationally invariant image representation for viewing direction classification in cryo-EM.

Authors: Zhizhen Zhao; Amit Singer
Journal: J Struct Biol Date: 2014-03-12 Impact factor: 2.867

7. An adaptation of the Wiener filter suitable for analyzing images of isolated single particles.

Authors: Charles V Sindelar; Nikolaus Grigorieff
Journal: J Struct Biol Date: 2011-07-02 Impact factor: 2.867

8. Automated multi-model reconstruction from single-particle electron microscopy data.

Authors: Maxim Shatsky; Richard J Hall; Eva Nogales; Jitendra Malik; Steven E Brenner
Journal: J Struct Biol Date: 2010-01-18 Impact factor: 2.867

9. CTF Challenge: Result summary.

Authors: Roberto Marabini; Bridget Carragher; Shaoxia Chen; James Chen; Anchi Cheng; Kenneth H Downing; Joachim Frank; Robert A Grassucci; J Bernard Heymann; Wen Jiang; Slavica Jonic; Hstau Y Liao; Steven J Ludtke; Shail Patwari; Angela L Piotrowski; Adrian Quintana; Carlos O S Sorzano; Henning Stahlberg; Javier Vargas; Neil R Voss; Wah Chiu; Jose M Carazo
Journal: J Struct Biol Date: 2015-04-23 Impact factor: 2.867

10. RELION: implementation of a Bayesian approach to cryo-EM structure determination.

Authors: Sjors H W Scheres
Journal: J Struct Biol Date: 2012-09-19 Impact factor: 2.867

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6. Centering Noisy Images with Application to Cryo-EM.

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9. Routine sub-2.5 Å cryo-EM structure determination of GPCRs.

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Journal: Nat Commun Date: 2021-07-15 Impact factor: 14.919

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