Literature DB >> 25901309

Simple versus complex models of trait evolution and stasis as a response to environmental change.

Gene Hunt1, Melanie J Hopkins2, Scott Lidgard3.   

Abstract

Previous analyses of evolutionary patterns, or modes, in fossil lineages have focused overwhelmingly on three simple models: stasis, random walks, and directional evolution. Here we use likelihood methods to fit an expanded set of evolutionary models to a large compilation of ancestor-descendant series of populations from the fossil record. In addition to the standard three models, we assess more complex models with punctuations and shifts from one evolutionary mode to another. As in previous studies, we find that stasis is common in the fossil record, as is a strict version of stasis that entails no real evolutionary changes. Incidence of directional evolution is relatively low (13%), but higher than in previous studies because our analytical approach can more sensitively detect noisy trends. Complex evolutionary models are often favored, overwhelmingly so for sequences comprising many samples. This finding is consistent with evolutionary dynamics that are, in reality, more complex than any of the models we consider. Furthermore, the timing of shifts in evolutionary dynamics varies among traits measured from the same series. Finally, we use our empirical collection of evolutionary sequences and a long and highly resolved proxy for global climate to inform simulations in which traits adaptively track temperature changes over time. When realistically calibrated, we find that this simple model can reproduce important aspects of our paleontological results. We conclude that observed paleontological patterns, including the prevalence of stasis, need not be inconsistent with adaptive evolution, even in the face of unstable physical environments.

Keywords:  climate change; evolutionary mode; gradualism; punctuated equilibrium; stasis

Mesh:

Substances:

Year:  2015        PMID: 25901309      PMCID: PMC4413263          DOI: 10.1073/pnas.1403662111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

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Authors: 
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Authors:  H D Sheets; C E Mitchell
Journal:  Genetica       Date:  2001       Impact factor: 1.082

3.  Climate change, body size evolution, and Cope's Rule in deep-sea ostracodes.

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Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

4.  Resolving the paradox of stasis: models with stabilizing selection explain evolutionary divergence on all timescales.

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Journal:  Am Nat       Date:  2007-01-04       Impact factor: 3.926

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Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

6.  Competition between cryptic species explains variations in rates of lineage evolution.

Authors:  Samuel Alizon; Michal Kucera; Vincent A A Jansen
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-19       Impact factor: 11.205

Review 7.  Simultaneous inference in general parametric models.

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8.  A comparative method for studying adaptation to a randomly evolving environment.

Authors:  Thomas F Hansen; Jason Pienaar; Steven Hecht Orzack
Journal:  Evolution       Date:  2008-04-29       Impact factor: 3.694

9.  Evolution of the earliest horses driven by climate change in the Paleocene-Eocene Thermal Maximum.

Authors:  Ross Secord; Jonathan I Bloch; Stephen G B Chester; Doug M Boyer; Aaron R Wood; Scott L Wing; Mary J Kraus; Francesca A McInerney; John Krigbaum
Journal:  Science       Date:  2012-02-24       Impact factor: 47.728

10.  Evolutionary mode routinely varies among morphological traits within fossil species lineages.

Authors:  Melanie J Hopkins; Scott Lidgard
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-26       Impact factor: 11.205

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  28 in total

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Authors:  David Jablonski; Neil H Shubin
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-21       Impact factor: 11.205

2.  Accelerated body size evolution during cold climatic periods in the Cenozoic.

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3.  Southern Ocean phytoplankton turnover in response to stepwise Antarctic cooling over the past 15 million years.

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4.  Sex and the shifting biodiversity dynamics of marine animals in deep time.

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5.  Vertebrate body size jumps the Wright way.

Authors:  Peter J Wagner
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6.  Energetic tradeoffs control the size distribution of aquatic mammals.

Authors:  William Gearty; Craig R McClain; Jonathan L Payne
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Review 7.  Getting somewhere with the Red Queen: chasing a biologically modern definition of the hypothesis.

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Journal:  Biol Lett       Date:  2018-05       Impact factor: 3.703

8.  The pace of modern culture.

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Journal:  Nat Hum Behav       Date:  2020-01-20

9.  Pattern and process in hominin brain size evolution are scale-dependent.

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10.  The ontogeny of Limulus polyphemus (Xiphosura s. str., Euchelicerata) revised: looking "under the skin".

Authors:  Carolin Haug; Marie A I N Rötzer
Journal:  Dev Genes Evol       Date:  2018-01-29       Impact factor: 0.900

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