| Literature DB >> 25878865 |
M Krishna Kumar1, P Pandi2, S Sudhahar1, G Chakkaravarthi3, R Mohan Kumar1.
Abstract
In the title 1:1 adduct, C6H7N·C7H7NO2, the carb-oxy-lic acid group is twisted at an angle of 4.32 (18)° with respect to the attached benzene ring. In the crystal, the carb-oxy-lic acid group is linked to the pyridine ring by an O-H⋯N hydrogen bond, forming a dimer. The dimers are linked by N-H⋯O hydrogen bonds, generating (010) sheets.Entities:
Keywords: O—H⋯N and N—H⋯O hydrogen bonds; adduct; crystal structure; layered structure
Year: 2015 PMID: 25878865 PMCID: PMC4384565 DOI: 10.1107/S2056989015000791
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C6H7N·C7H7NO2 | |
| Monoclinic, | Mo |
| Hall symbol: P -2yc | Cell parameters from 2749 reflections |
| θ = 3.4–21.8° | |
| µ = 0.09 mm−1 | |
| β = 114.200 (3)° | Block, colourless |
| 0.28 × 0.24 × 0.20 mm | |
| Bruker Kappa APEXII CCD diffractometer | 2144 independent reflections |
| Radiation source: fine-focus sealed tube | 1458 reflections with |
| Graphite monochromator | |
| ω and φ scan | θmax = 26.7°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 10064 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2144 reflections | Δρmax = 0.12 e Å−3 |
| 159 parameters | Δρmin = −0.13 e Å−3 |
| 3 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.013 (4) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | 0.3693 (4) | 0.1034 (2) | 0.7149 (4) | 0.0567 (6) | |
| C2 | 0.4434 (4) | 0.2029 (2) | 0.6722 (4) | 0.0591 (7) | |
| H2 | 0.3671 | 0.2471 | 0.5675 | 0.071* | |
| C3 | 0.6273 (4) | 0.2362 (2) | 0.7829 (3) | 0.0558 (6) | |
| H3 | 0.6737 | 0.3037 | 0.7529 | 0.067* | |
| C4 | 0.7475 (4) | 0.1730 (2) | 0.9383 (4) | 0.0508 (6) | |
| C5 | 0.6737 (4) | 0.0738 (2) | 0.9798 (4) | 0.0594 (7) | |
| H5 | 0.7516 | 0.0294 | 1.0835 | 0.071* | |
| C6 | 0.4892 (4) | 0.0392 (2) | 0.8724 (4) | 0.0629 (7) | |
| H6 | 0.4429 | −0.0278 | 0.9043 | 0.076* | |
| C7 | 0.9416 (4) | 0.2104 (2) | 1.0596 (4) | 0.0587 (7) | |
| C8 | 0.4371 (5) | 0.4546 (2) | 1.3188 (5) | 0.0729 (8) | |
| H8 | 0.3567 | 0.5148 | 1.3183 | 0.087* | |
| C9 | 0.6306 (4) | 0.4655 (2) | 1.4263 (4) | 0.0693 (8) | |
| H9 | 0.6791 | 0.5319 | 1.4967 | 0.083* | |
| C10 | 0.7534 (4) | 0.3784 (2) | 1.4304 (4) | 0.0639 (7) | |
| C11 | 0.6716 (4) | 0.2836 (2) | 1.3242 (4) | 0.0718 (8) | |
| H11 | 0.7487 | 0.2220 | 1.3229 | 0.086* | |
| C12 | 0.4767 (5) | 0.2790 (3) | 1.2196 (4) | 0.0766 (9) | |
| H12 | 0.4249 | 0.2135 | 1.1479 | 0.092* | |
| C13 | 0.9658 (5) | 0.3866 (3) | 1.5468 (6) | 0.0954 (11) | |
| H13A | 1.0310 | 0.3941 | 1.4635 | 0.143* | |
| H13B | 1.0099 | 0.3186 | 1.6229 | 0.143* | |
| H13C | 0.9930 | 0.4524 | 1.6289 | 0.143* | |
| N1 | 0.1840 (4) | 0.0710 (2) | 0.6087 (4) | 0.0827 (8) | |
| H1A | 0.1113 | 0.1124 | 0.5137 | 0.099* | |
| H1B | 0.1395 | 0.0092 | 0.6364 | 0.099* | |
| N2 | 0.3582 (3) | 0.3627 (2) | 1.2152 (4) | 0.0722 (6) | |
| O1 | 0.9921 (3) | 0.30989 (17) | 1.0123 (3) | 0.0808 (6) | |
| H1 | 1.109 (2) | 0.324 (3) | 1.076 (5) | 0.121* | |
| O2 | 1.0516 (3) | 0.15755 (17) | 1.1996 (3) | 0.0778 (6) |
| C1 | 0.0545 (16) | 0.0584 (15) | 0.0526 (15) | −0.0071 (14) | 0.0173 (13) | −0.0070 (14) |
| C2 | 0.0599 (17) | 0.0581 (15) | 0.0489 (15) | 0.0009 (12) | 0.0118 (13) | 0.0088 (12) |
| C3 | 0.0582 (16) | 0.0536 (13) | 0.0509 (15) | −0.0050 (13) | 0.0175 (13) | 0.0058 (12) |
| C4 | 0.0529 (14) | 0.0490 (12) | 0.0442 (13) | 0.0040 (12) | 0.0135 (12) | 0.0026 (12) |
| C5 | 0.0671 (18) | 0.0516 (14) | 0.0484 (16) | 0.0021 (13) | 0.0124 (14) | 0.0046 (12) |
| C6 | 0.077 (2) | 0.0518 (14) | 0.0590 (17) | −0.0076 (14) | 0.0273 (15) | 0.0048 (13) |
| C7 | 0.0563 (17) | 0.0532 (13) | 0.0583 (17) | 0.0045 (13) | 0.0150 (14) | 0.0003 (14) |
| C8 | 0.0630 (18) | 0.0626 (16) | 0.081 (2) | 0.0031 (15) | 0.0172 (16) | 0.0007 (16) |
| C9 | 0.068 (2) | 0.0617 (17) | 0.0665 (19) | −0.0085 (14) | 0.0150 (16) | −0.0042 (13) |
| C10 | 0.0579 (18) | 0.0740 (17) | 0.0585 (17) | −0.0045 (16) | 0.0225 (14) | 0.0063 (15) |
| C11 | 0.0680 (19) | 0.0723 (18) | 0.078 (2) | 0.0015 (15) | 0.0325 (18) | −0.0048 (16) |
| C12 | 0.077 (2) | 0.0747 (19) | 0.074 (2) | −0.0158 (17) | 0.0260 (17) | −0.0171 (16) |
| C13 | 0.0604 (19) | 0.105 (2) | 0.104 (3) | −0.0070 (17) | 0.0163 (18) | 0.002 (2) |
| N1 | 0.0655 (16) | 0.0852 (18) | 0.0809 (18) | −0.0163 (13) | 0.0132 (14) | 0.0063 (15) |
| N2 | 0.0567 (14) | 0.0719 (15) | 0.0766 (16) | −0.0059 (13) | 0.0157 (12) | −0.0023 (13) |
| O1 | 0.0588 (11) | 0.0691 (12) | 0.0883 (16) | −0.0105 (10) | 0.0035 (11) | 0.0130 (11) |
| O2 | 0.0678 (13) | 0.0726 (12) | 0.0665 (12) | 0.0068 (10) | 0.0006 (10) | 0.0090 (10) |
| C1—N1 | 1.359 (4) | C8—H8 | 0.9300 |
| C1—C2 | 1.387 (3) | C9—C10 | 1.371 (4) |
| C1—C6 | 1.397 (4) | C9—H9 | 0.9300 |
| C2—C3 | 1.361 (4) | C10—C11 | 1.363 (4) |
| C2—H2 | 0.9300 | C10—C13 | 1.493 (5) |
| C3—C4 | 1.380 (3) | C11—C12 | 1.366 (4) |
| C3—H3 | 0.9300 | C11—H11 | 0.9300 |
| C4—C5 | 1.379 (3) | C12—N2 | 1.319 (4) |
| C4—C7 | 1.452 (3) | C12—H12 | 0.9300 |
| C5—C6 | 1.364 (4) | C13—H13A | 0.9600 |
| C5—H5 | 0.9300 | C13—H13B | 0.9600 |
| C6—H6 | 0.9300 | C13—H13C | 0.9600 |
| C7—O2 | 1.224 (3) | N1—H1A | 0.8600 |
| C7—O1 | 1.319 (3) | N1—H1B | 0.8600 |
| C8—N2 | 1.323 (3) | O1—H1 | 0.836 (10) |
| C8—C9 | 1.365 (4) | ||
| N1—C1—C2 | 120.8 (2) | C8—C9—C10 | 119.9 (3) |
| N1—C1—C6 | 121.2 (2) | C8—C9—H9 | 120.0 |
| C2—C1—C6 | 118.0 (2) | C10—C9—H9 | 120.0 |
| C3—C2—C1 | 120.2 (2) | C11—C10—C9 | 116.6 (3) |
| C3—C2—H2 | 119.9 | C11—C10—C13 | 121.7 (3) |
| C1—C2—H2 | 119.9 | C9—C10—C13 | 121.7 (3) |
| C2—C3—C4 | 122.2 (2) | C10—C11—C12 | 120.2 (3) |
| C2—C3—H3 | 118.9 | C10—C11—H11 | 119.9 |
| C4—C3—H3 | 118.9 | C12—C11—H11 | 119.9 |
| C5—C4—C3 | 117.4 (2) | N2—C12—C11 | 123.4 (3) |
| C5—C4—C7 | 120.4 (2) | N2—C12—H12 | 118.3 |
| C3—C4—C7 | 122.1 (2) | C11—C12—H12 | 118.3 |
| C6—C5—C4 | 121.5 (2) | C10—C13—H13A | 109.5 |
| C6—C5—H5 | 119.2 | C10—C13—H13B | 109.5 |
| C4—C5—H5 | 119.2 | H13A—C13—H13B | 109.5 |
| C5—C6—C1 | 120.6 (2) | C10—C13—H13C | 109.5 |
| C5—C6—H6 | 119.7 | H13A—C13—H13C | 109.5 |
| C1—C6—H6 | 119.7 | H13B—C13—H13C | 109.5 |
| O2—C7—O1 | 120.9 (3) | C1—N1—H1A | 120.0 |
| O2—C7—C4 | 124.1 (2) | C1—N1—H1B | 120.0 |
| O1—C7—C4 | 115.0 (2) | H1A—N1—H1B | 120.0 |
| N2—C8—C9 | 123.3 (3) | C12—N2—C8 | 116.6 (3) |
| N2—C8—H8 | 118.4 | C7—O1—H1 | 112 (3) |
| C9—C8—H8 | 118.4 | ||
| N1—C1—C2—C3 | 178.1 (3) | C3—C4—C7—O2 | 179.2 (3) |
| C6—C1—C2—C3 | −0.5 (4) | C5—C4—C7—O1 | −176.1 (2) |
| C1—C2—C3—C4 | 0.9 (4) | C3—C4—C7—O1 | 1.3 (3) |
| C2—C3—C4—C5 | −0.5 (4) | N2—C8—C9—C10 | 0.0 (5) |
| C2—C3—C4—C7 | −178.1 (2) | C8—C9—C10—C11 | −0.2 (4) |
| C3—C4—C5—C6 | −0.2 (4) | C8—C9—C10—C13 | −179.7 (3) |
| C7—C4—C5—C6 | 177.4 (2) | C9—C10—C11—C12 | 0.4 (4) |
| C4—C5—C6—C1 | 0.5 (4) | C13—C10—C11—C12 | 179.9 (3) |
| N1—C1—C6—C5 | −178.8 (3) | C10—C11—C12—N2 | −0.4 (5) |
| C2—C1—C6—C5 | −0.2 (4) | C11—C12—N2—C8 | 0.1 (5) |
| C5—C4—C7—O2 | 1.7 (4) | C9—C8—N2—C12 | 0.1 (5) |
| H··· | ||||
| O1—H1···N2i | 0.84 (1) | 1.81 (1) | 2.644 (3) | 177 (4) |
| N1—H1 | 0.86 | 2.32 | 3.049 (3) | 142 |
| N1—H1 | 0.86 | 2.17 | 3.031 (3) | 174 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O1H1N2i | 0.84(1) | 1.81(1) | 2.644(3) | 177(4) |
| N1H1 | 0.86 | 2.32 | 3.049(3) | 142 |
| N1H1 | 0.86 | 2.17 | 3.031(3) | 174 |
Symmetry codes: (i) ; (ii) ; (iii) .