Literature DB >> 25758958

Optimization of recombinant expression enables discovery of novel cytochrome P450 activity in rice diterpenoid biosynthesis.

Naoki Kitaoka1, Yisheng Wu, Meimei Xu, Reuben J Peters.   

Abstract

The oxygenation reactions catalyzed by cytochromes P450 (CYPs) play critical roles in plant natural products biosynthesis. At the same time, CYPs are one of most challenging enzymes to functionally characterize due to the difficulty of recombinantly expressing these membrane-associated monooxygenases. In the course of investigating rice diterpenoid biosynthesis, we have developed a synthetic biology approach for functional expression of relevant CYPs in Escherichia coli. In certain cases, activity was observed for only one of two closely related paralogs although it seems clear that related reactions are required for production of the known diterpenoids. Here, we report that optimization of the recombinant expression system enabled characterization of not only these previously recalcitrant CYPs, but also discovery of additional activity relevant to rice diterpenoid biosynthesis. Of particular interest, CYP701A8 was found to catalyze 3β-hydroxylation of syn-pimaradiene, which is presumably relevant to momilactone biosynthesis, while CYP71Z6 & 7 were found to catalyze multiple reactions, with CYP71Z6 catalyzing the production of 2α,3α-dihydroxy-ent-isokaurene via 2α-hydroxy-ent-isokaurene, and CYP71Z7 catalyzing the production of 3α-hydroxy-ent-cassadien-2-one via 2α-hydroxy-ent-cassadiene and ent-cassadien-2-one, which may be relevant to oryzadione and phytocassane biosynthesis, respectively.

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Year:  2015        PMID: 25758958      PMCID: PMC4546517          DOI: 10.1007/s00253-015-6496-2

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  29 in total

1.  THE CARBON MONOXIDE-BINDING PIGMENT OF LIVER MICROSOMES. II. SOLUBILIZATION, PURIFICATION, AND PROPERTIES.

Authors:  T OMURA; R SATO
Journal:  J Biol Chem       Date:  1964-07       Impact factor: 5.157

Review 2.  Two rings in them all: the labdane-related diterpenoids.

Authors:  Reuben J Peters
Journal:  Nat Prod Rep       Date:  2010-10-01       Impact factor: 13.423

3.  Characterization of CYP76M5-8 indicates metabolic plasticity within a plant biosynthetic gene cluster.

Authors:  Qiang Wang; Matthew L Hillwig; Kazunori Okada; Kohei Yamazaki; Yisheng Wu; Sivakumar Swaminathan; Hisakazu Yamane; Reuben J Peters
Journal:  J Biol Chem       Date:  2012-01-03       Impact factor: 5.157

4.  CYP701A8: a rice ent-kaurene oxidase paralog diverted to more specialized diterpenoid metabolism.

Authors:  Qiang Wang; Matthew L Hillwig; Yisheng Wu; Reuben J Peters
Journal:  Plant Physiol       Date:  2012-01-12       Impact factor: 8.340

Review 5.  Diversity of P450 enzymes in the biosynthesis of natural products.

Authors:  Larissa M Podust; David H Sherman
Journal:  Nat Prod Rep       Date:  2012-07-23       Impact factor: 13.423

6.  Cloning, yeast expression, and characterization of the coupling of two distantly related Arabidopsis thaliana NADPH-cytochrome P450 reductases with P450 CYP73A5.

Authors:  P Urban; C Mignotte; M Kazmaier; F Delorme; D Pompon
Journal:  J Biol Chem       Date:  1997-08-01       Impact factor: 5.157

7.  Picking sides: distinct roles for CYP76M6 and CYP76M8 in rice oryzalexin biosynthesis.

Authors:  Yisheng Wu; Qiang Wang; Matthew L Hillwig; Reuben J Peters
Journal:  Biochem J       Date:  2013-09-01       Impact factor: 3.857

8.  Identification of syn-pimara-7,15-diene synthase reveals functional clustering of terpene synthases involved in rice phytoalexin/allelochemical biosynthesis.

Authors:  P Ross Wilderman; Meimei Xu; Yinghua Jin; Robert M Coates; Reuben J Peters
Journal:  Plant Physiol       Date:  2004-08-06       Impact factor: 8.340

9.  A rice semi-dwarf gene, Tan-Ginbozu (D35), encodes the gibberellin biosynthesis enzyme, ent-kaurene oxidase.

Authors:  Hironori Itoh; Tomoko Tatsumi; Tomoaki Sakamoto; Kazuko Otomo; Tomonobu Toyomasu; Hidemi Kitano; Motoyuki Ashikari; Shigeyuki Ichihara; Makoto Matsuoka
Journal:  Plant Mol Biol       Date:  2004-03       Impact factor: 4.076

10.  Antibacterial diterpenes and their fatty acid conjugates from rice leaves.

Authors:  Yoshiki Kono; Aya Kojima; Rieko Nagai; Manabu Watanabe; Takahiro Kawashima; Tsugu Onizawa; Tohru Teraoka; Minoru Watanab; Hiroyuki Koshino; Jun Uzawa; Yoshikatsu Suzuki; Akira Sakurai
Journal:  Phytochemistry       Date:  2004-05       Impact factor: 4.072

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  15 in total

1.  Why are momilactones always associated with biosynthetic gene clusters in plants?

Authors:  Juan Zhang; Reuben J Peters
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-02       Impact factor: 11.205

2.  Doing the gene shuffle to close synteny: dynamic assembly of biosynthetic gene clusters.

Authors:  Reuben J Peters
Journal:  New Phytol       Date:  2020-05-20       Impact factor: 10.151

Review 3.  The application of synthetic biology to elucidation of plant mono-, sesqui-, and diterpenoid metabolism.

Authors:  Naoki Kitaoka; Xuan Lu; Bing Yang; Reuben J Peters
Journal:  Mol Plant       Date:  2014-12-11       Impact factor: 13.164

4.  Overcoming heterologous protein interdependency to optimize P450-mediated Taxol precursor synthesis in Escherichia coli.

Authors:  Bradley Walters Biggs; Chin Giaw Lim; Kristen Sagliani; Smriti Shankar; Gregory Stephanopoulos; Marjan De Mey; Parayil Kumaran Ajikumar
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

5.  Investigating inducible short-chain alcohol dehydrogenases/reductases clarifies rice oryzalexin biosynthesis.

Authors:  Naoki Kitaoka; Yisheng Wu; Jiachen Zi; Reuben J Peters
Journal:  Plant J       Date:  2016-09-01       Impact factor: 6.417

6.  Probing the promiscuity of ent-kaurene oxidases via combinatorial biosynthesis.

Authors:  Sibongile Mafu; Meirong Jia; Jiachen Zi; Dana Morrone; Yisheng Wu; Meimei Xu; Matthew L Hillwig; Reuben J Peters
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-16       Impact factor: 11.205

7.  CYP71Z18 overexpression confers elevated blast resistance in transgenic rice.

Authors:  Qinqin Shen; Qingyu Pu; Jin Liang; Hongjie Mao; Jiang Liu; Qiang Wang
Journal:  Plant Mol Biol       Date:  2019-05-15       Impact factor: 4.076

8.  Rice contains a biosynthetic gene cluster associated with production of the casbane-type diterpenoid phytoalexin ent-10-oxodepressin.

Authors:  Jin Liang; Qinqin Shen; Liping Wang; Jiang Liu; Jingye Fu; Le Zhao; Meimei Xu; Reuben J Peters; Qiang Wang
Journal:  New Phytol       Date:  2021-05-13       Impact factor: 10.323

9.  Interdependent evolution of biosynthetic gene clusters for momilactone production in rice.

Authors:  Naoki Kitaoka; Juan Zhang; Richard K Oyagbenro; Benjamin Brown; Yisheng Wu; Bing Yang; Zhaohu Li; Reuben J Peters
Journal:  Plant Cell       Date:  2021-04-17       Impact factor: 11.277

10.  Rerouting plant terpene biosynthesis enables momilactone pathway elucidation.

Authors:  Ricardo De La Peña; Elizabeth S Sattely
Journal:  Nat Chem Biol       Date:  2020-10-26       Impact factor: 15.040

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