Literature DB >> 32433781

Doing the gene shuffle to close synteny: dynamic assembly of biosynthetic gene clusters.

Reuben J Peters1.   

Abstract

Entities:  

Keywords:  Brassicaceae; biosynthetic gene clusters (BGCs); dynamic gene shuffling; momilactones; plant genome organization; specialized metabolism; synteny; triterpenoid diversity

Mesh：

Year:  2020        PMID： 32433781      PMCID： PMC7856633          DOI： 10.1111/nph.16631

Source DB:  PubMed          Journal:  New Phytol        ISSN： 0028-646X            Impact factor:   10.151


× No keyword cloud information.
  14 in total

1.  Characterization of CYP76M5-8 indicates metabolic plasticity within a plant biosynthetic gene cluster.

Authors:  Qiang Wang; Matthew L Hillwig; Kazunori Okada; Kohei Yamazaki; Yisheng Wu; Sivakumar Swaminathan; Hisakazu Yamane; Reuben J Peters
Journal:  J Biol Chem       Date:  2012-01-03       Impact factor: 5.157

2.  CYP701A8: a rice ent-kaurene oxidase paralog diverted to more specialized diterpenoid metabolism.

Authors:  Qiang Wang; Matthew L Hillwig; Yisheng Wu; Reuben J Peters
Journal:  Plant Physiol       Date:  2012-01-12       Impact factor: 8.340

3.  Optimization of recombinant expression enables discovery of novel cytochrome P450 activity in rice diterpenoid biosynthesis.

Authors:  Naoki Kitaoka; Yisheng Wu; Meimei Xu; Reuben J Peters
Journal:  Appl Microbiol Biotechnol       Date:  2015-03-12       Impact factor: 4.813

4.  Investigation of terpene diversification across multiple sequenced plant genomes.

Authors:  Alexander M Boutanaev; Tessa Moses; Jiachen Zi; David R Nelson; Sam T Mugford; Reuben J Peters; Anne Osbourn
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-10       Impact factor: 11.205

5.  Evolutionary trajectory of phytoalexin biosynthetic gene clusters in rice.

Authors:  Koji Miyamoto; Masahiro Fujita; Matthew R Shenton; Shota Akashi; Chizu Sugawara; Arisa Sakai; Kiyotaka Horie; Morifumi Hasegawa; Hiroshi Kawaide; Wataru Mitsuhashi; Hideaki Nojiri; Hisakazu Yamane; Nori Kurata; Kazunori Okada; Tomonobu Toyomasu
Journal:  Plant J       Date:  2016-07-08       Impact factor: 6.417

6.  A specialized metabolic network selectively modulates Arabidopsis root microbiota.

Authors:  Ancheng C Huang; Ting Jiang; Yong-Xin Liu; Yue-Chen Bai; James Reed; Baoyuan Qu; Alain Goossens; Hans-Wilhelm Nützmann; Yang Bai; Anne Osbourn
Journal:  Science       Date:  2019-05-10       Impact factor: 63.714

Review 7.  Metabolic Gene Clusters in Eukaryotes.

Authors:  Hans-Wilhelm Nützmann; Claudio Scazzocchio; Anne Osbourn
Journal:  Annu Rev Genet       Date:  2018-09-05       Impact factor: 13.826

8.  The ancient CYP716 family is a major contributor to the diversification of eudicot triterpenoid biosynthesis.

Authors:  Karel Miettinen; Jacob Pollier; Dieter Buyst; Philipp Arendt; René Csuk; Sven Sommerwerk; Tessa Moses; Jan Mertens; Prashant D Sonawane; Laurens Pauwels; Asaph Aharoni; José Martins; David R Nelson; Alain Goossens
Journal:  Nat Commun       Date:  2017-02-06       Impact factor: 14.919

9.  Echinochloa crus-galli genome analysis provides insight into its adaptation and invasiveness as a weed.

Authors:  Longbiao Guo; Jie Qiu; Chuyu Ye; Gulei Jin; Lingfeng Mao; Haiqiang Zhang; Xuefang Yang; Qiong Peng; Yingying Wang; Lei Jia; Zhangxiang Lin; Gengmi Li; Fei Fu; Chen Liu; Li Chen; Enhui Shen; Weidi Wang; Qinjie Chu; Dongya Wu; Sanling Wu; Chenyang Xia; Yongfei Zhang; Xiaomao Zhou; Lifeng Wang; Lamei Wu; Weijie Song; Yunfei Wang; Qingyao Shu; Daisuke Aoki; Emi Yumoto; Takao Yokota; Koji Miyamoto; Kazunori Okada; Do-Soon Kim; Daguang Cai; Chulong Zhang; Yonggen Lou; Qian Qian; Hirofumi Yamaguchi; Hisakazu Yamane; Chui-Hua Kong; Michael P Timko; Lianyang Bai; Longjiang Fan
Journal:  Nat Commun       Date:  2017-10-18       Impact factor: 14.919

10.  HpDTC1, a Stress-Inducible Bifunctional Diterpene Cyclase Involved in Momilactone Biosynthesis, Functions in Chemical Defence in the Moss Hypnum plumaeforme.

Authors:  Kazunori Okada; Hiroshi Kawaide; Koji Miyamoto; Sho Miyazaki; Ryosuke Kainuma; Honoka Kimura; Kaoru Fujiwara; Masahiro Natsume; Hideaki Nojiri; Masatoshi Nakajima; Hisakazu Yamane; Yuki Hatano; Hiroshi Nozaki; Ken-Ichiro Hayashi
Journal:  Sci Rep       Date:  2016-05-03       Impact factor: 4.379
View more
  8 in total

1.  Why are momilactones always associated with biosynthetic gene clusters in plants?

Authors:  Juan Zhang; Reuben J Peters
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-02       Impact factor: 11.205

2.  The emerging role of biosynthetic gene clusters in plant defense and plant interactions.

Authors:  Guy Polturak; Anne Osbourn
Journal:  PLoS Pathog       Date:  2021-07-02       Impact factor: 6.823

3.  Rice contains a biosynthetic gene cluster associated with production of the casbane-type diterpenoid phytoalexin ent-10-oxodepressin.

Authors:  Jin Liang; Qinqin Shen; Liping Wang; Jiang Liu; Jingye Fu; Le Zhao; Meimei Xu; Reuben J Peters; Qiang Wang
Journal:  New Phytol       Date:  2021-05-13       Impact factor: 10.323

4.  Evolution of a plant gene cluster in Solanaceae and emergence of metabolic diversity.

Authors:  Pengxiang Fan; Peipei Wang; Yann-Ru Lou; Bryan J Leong; Bethany M Moore; Craig A Schenck; Rachel Combs; Pengfei Cao; Federica Brandizzi; Shin-Han Shiu; Robert L Last
Journal:  Elife       Date:  2020-07-02       Impact factor: 8.140

Review 5.  Plant biosynthetic gene clusters in the context of metabolic evolution.

Authors:  Samuel J Smit; Benjamin R Lichman
Journal:  Nat Prod Rep       Date:  2022-07-20       Impact factor: 15.111

6.  A gene cluster in Ginkgo biloba encodes unique multifunctional cytochrome P450s that initiate ginkgolide biosynthesis.

Authors:  Victor Forman; Dan Luo; Fernando Geu-Flores; René Lemcke; David R Nelson; Sotirios C Kampranis; Dan Staerk; Birger Lindberg Møller; Irini Pateraki
Journal:  Nat Commun       Date:  2022-09-01       Impact factor: 17.694

7.  Lateral transfers lead to the birth of momilactone biosynthetic gene clusters in grass.

Authors:  Dongya Wu; Yiyu Hu; Shota Akashi; Hideaki Nojiri; Longbiao Guo; Chu-Yu Ye; Qian-Hao Zhu; Kazunori Okada; Longjiang Fan
Journal:  Plant J       Date:  2022-07-18       Impact factor: 7.091

8.  Interdependent evolution of biosynthetic gene clusters for momilactone production in rice.

Authors:  Naoki Kitaoka; Juan Zhang; Richard K Oyagbenro; Benjamin Brown; Yisheng Wu; Bing Yang; Zhaohu Li; Reuben J Peters
Journal:  Plant Cell       Date:  2021-04-17       Impact factor: 11.277
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.