Literature DB >> 22215681

Characterization of CYP76M5-8 indicates metabolic plasticity within a plant biosynthetic gene cluster.

Qiang Wang1, Matthew L Hillwig, Kazunori Okada, Kohei Yamazaki, Yisheng Wu, Sivakumar Swaminathan, Hisakazu Yamane, Reuben J Peters.   

Abstract

Recent reports have revealed genomic clustering of enzymatic genes for particular biosynthetic pathways in plant specialized/secondary metabolism. Rice (Oryza sativa) carries two such clusters for production of antimicrobial diterpenoid phytoalexins, with the cluster on chromosome 2 containing four closely related/homologous members of the cytochrome P450 CYP76M subfamily (CYP76M5-8). Notably, the underlying evolutionary expansion of these CYP appears to have occurred after assembly of the ancestral biosynthetic gene cluster, suggesting separate roles. It has been demonstrated that CYP76M7 catalyzes C11α-hydroxylation of ent-cassadiene, and presumably mediates an early step in biosynthesis of the derived phytocassane class of phytoalexins. Here we report biochemical characterization of CYP76M5, -6, and -8. Our results indicate that CYP76M8 is a multifunctional/promiscuous hydroxylase, with CYP76M5 and -7 seeming to provide only redundant activity, while CYP76M6 seems to provide both redundant and novel activity, relative to CYP76M8. RNAi-mediated double knockdown of CYP76M7 and -8 suppresses elicitor inducible phytocassane production, indicating a role for these monooxygenases in phytocassane biosynthesis. In addition, our data suggests that CYP76M5, -6, and -8 may play redundant roles in production of the oryzalexin class of phytoalexins as well. Intriguingly, the preceding diterpene synthase for oryzalexin biosynthesis, unlike that for the phytocassanes, is not found in the chromosome 2 diterpenoid biosynthetic gene cluster. Accordingly, our results not only uncover a complex evolutionary history, but also further suggest some intriguing differences between plant biosynthetic gene clusters and the seemingly similar microbial operons. The implications for the underlying metabolic evolution of plants are then discussed.

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Year:  2012        PMID: 22215681      PMCID: PMC3307284          DOI: 10.1074/jbc.M111.305599

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  38 in total

1.  THE CARBON MONOXIDE-BINDING PIGMENT OF LIVER MICROSOMES. II. SOLUBILIZATION, PURIFICATION, AND PROPERTIES.

Authors:  T OMURA; R SATO
Journal:  J Biol Chem       Date:  1964-07       Impact factor: 5.157

Review 2.  Two rings in them all: the labdane-related diterpenoids.

Authors:  Reuben J Peters
Journal:  Nat Prod Rep       Date:  2010-10-01       Impact factor: 13.423

3.  Plant cells recognize chitin fragments for defense signaling through a plasma membrane receptor.

Authors:  Hanae Kaku; Yoko Nishizawa; Naoko Ishii-Minami; Chiharu Akimoto-Tomiyama; Naoshi Dohmae; Koji Takio; Eiichi Minami; Naoto Shibuya
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-07       Impact factor: 11.205

4.  Uncovering the complex metabolic network underlying diterpenoid phytoalexin biosynthesis in rice and other cereal crop plants.

Authors:  Reuben J Peters
Journal:  Phytochemistry       Date:  2006-09-07       Impact factor: 4.072

5.  Elicitation of Diterpene Biosynthesis in Rice (Oryza sativa L.) by Chitin.

Authors:  Y Y Ren; C A West
Journal:  Plant Physiol       Date:  1992-07       Impact factor: 8.340

6.  Evident and latent plasticity across the rice diterpene synthase family with potential implications for the evolution of diterpenoid metabolism in the cereals.

Authors:  Dana Morrone; Matthew L Hillwig; Matthew E Mead; Luke Lowry; D Bruce Fulton; Reuben J Peters
Journal:  Biochem J       Date:  2011-05-01       Impact factor: 3.857

7.  Identification of syn-pimara-7,15-diene synthase reveals functional clustering of terpene synthases involved in rice phytoalexin/allelochemical biosynthesis.

Authors:  P Ross Wilderman; Meimei Xu; Yinghua Jin; Robert M Coates; Reuben J Peters
Journal:  Plant Physiol       Date:  2004-08-06       Impact factor: 8.340

8.  Metabolic diversification--independent assembly of operon-like gene clusters in different plants.

Authors:  Ben Field; Anne E Osbourn
Journal:  Science       Date:  2008-03-20       Impact factor: 47.728

9.  A gene cluster for secondary metabolism in oat: implications for the evolution of metabolic diversity in plants.

Authors:  X Qi; S Bakht; M Leggett; C Maxwell; R Melton; A Osbourn
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-17       Impact factor: 11.205

10.  Cholic acid, a bile acid elicitor of hypersensitive cell death, pathogenesis-related protein synthesis, and phytoalexin accumulation in rice.

Authors:  Jinichiro Koga; Hidetoshi Kubota; Shuichi Gomi; Kenji Umemura; Masao Ohnishi; Toshiaki Kono
Journal:  Plant Physiol       Date:  2006-02-03       Impact factor: 8.340

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  48 in total

1.  CYP76B74 Catalyzes the 3''-Hydroxylation of Geranylhydroquinone in Shikonin Biosynthesis.

Authors:  Sheng Wang; Ruishan Wang; Tan Liu; Chaogeng Lv; Jiuwen Liang; Chuanzhi Kang; Liangyun Zhou; Juan Guo; Guanghong Cui; Yan Zhang; Daniele Werck-Reichhart; Lanping Guo; Luqi Huang
Journal:  Plant Physiol       Date:  2018-11-29       Impact factor: 8.340

2.  Diminishing returns and tradeoffs constrain the laboratory optimization of an enzyme.

Authors:  Nobuhiko Tokuriki; Colin J Jackson; Livnat Afriat-Jurnou; Kirsten T Wyganowski; Renmei Tang; Dan S Tawfik
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

3.  CYP76C1 (Cytochrome P450)-Mediated Linalool Metabolism and the Formation of Volatile and Soluble Linalool Oxides in Arabidopsis Flowers: A Strategy for Defense against Floral Antagonists.

Authors:  Benoît Boachon; Robert R Junker; Laurence Miesch; Jean-Etienne Bassard; René Höfer; Robin Caillieaudeaux; Dana E Seidel; Agnès Lesot; Clément Heinrich; Jean-François Ginglinger; Lionel Allouche; Bruno Vincent; Dinar S C Wahyuni; Christian Paetz; Franziska Beran; Michel Miesch; Bernd Schneider; Kirsten Leiss; Danièle Werck-Reichhart
Journal:  Plant Cell       Date:  2015-10-16       Impact factor: 11.277

4.  Parsing a multifunctional biosynthetic gene cluster from rice: Biochemical characterization of CYP71Z6 & 7.

Authors:  Yisheng Wu; Matthew L Hillwig; Qiang Wang; Reuben J Peters
Journal:  FEBS Lett       Date:  2011-10-05       Impact factor: 4.124

5.  Optimization of recombinant expression enables discovery of novel cytochrome P450 activity in rice diterpenoid biosynthesis.

Authors:  Naoki Kitaoka; Yisheng Wu; Meimei Xu; Reuben J Peters
Journal:  Appl Microbiol Biotechnol       Date:  2015-03-12       Impact factor: 4.813

6.  Why are momilactones always associated with biosynthetic gene clusters in plants?

Authors:  Juan Zhang; Reuben J Peters
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-02       Impact factor: 11.205

7.  Gene discovery of modular diterpene metabolism in nonmodel systems.

Authors:  Philipp Zerbe; Björn Hamberger; Macaire M S Yuen; Angela Chiang; Harpreet K Sandhu; Lina L Madilao; Anh Nguyen; Britta Hamberger; Søren Spanner Bach; Jörg Bohlmann
Journal:  Plant Physiol       Date:  2013-04-23       Impact factor: 8.340

8.  Production of bioactive diterpenoids in the euphorbiaceae depends on evolutionarily conserved gene clusters.

Authors:  Andrew J King; Geoffrey D Brown; Alison D Gilday; Tony R Larson; Ian A Graham
Journal:  Plant Cell       Date:  2014-08-29       Impact factor: 11.277

9.  Dual function of the cytochrome P450 CYP76 family from Arabidopsis thaliana in the metabolism of monoterpenols and phenylurea herbicides.

Authors:  René Höfer; Benoît Boachon; Hugues Renault; Carole Gavira; Laurence Miesch; Juliana Iglesias; Jean-François Ginglinger; Lionel Allouche; Michel Miesch; Sebastien Grec; Romain Larbat; Danièle Werck-Reichhart
Journal:  Plant Physiol       Date:  2014-07-31       Impact factor: 8.340

10.  Functional characterization of wheat ent-kaurene(-like) synthases indicates continuing evolution of labdane-related diterpenoid metabolism in the cereals.

Authors:  Ke Zhou; Meimei Xu; Mollie Tiernan; Qian Xie; Tomonobu Toyomasu; Chizu Sugawara; Madoka Oku; Masami Usui; Wataru Mitsuhashi; Makiko Chono; Peter M Chandler; Reuben J Peters
Journal:  Phytochemistry       Date:  2012-09-22       Impact factor: 4.072

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