Literature DB >> 22820933

Diversity of P450 enzymes in the biosynthesis of natural products.

Larissa M Podust1, David H Sherman.   

Abstract

Diverse oxygenation patterns of natural products generated by secondary metabolic pathways in microorganisms and plants are largely achieved through the tailoring reactions catalysed by cytochrome P450 enzymes (P450s). P450s are a large family of oxidative hemoproteins found in all life forms from prokaryotes to humans. Understanding the reactivity and selectivity of these fascinating C-H bond-activating catalysts will advance their use in generating valuable pharmaceuticals and products for medicine, agriculture and industry. A major strength of this P450 group is its set of established enzyme-substrate relationships, the source of the most detailed knowledge on how P450 enzymes work. Engineering microbial-derived P450 enzymes to accommodate alternative substrates and add new functions continues to be an important near- and long-term practical goal driving the structural characterization of these molecules. Understanding the natural evolution of P450 structure-function should accelerate metabolic engineering and directed evolutionary approaches to enhance diversification of natural product structures and other biosynthetic applications.

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Year:  2012        PMID: 22820933      PMCID: PMC3454455          DOI: 10.1039/c2np20020a

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  114 in total

1.  Laboratory evolution of peroxide-mediated cytochrome P450 hydroxylation.

Authors:  H Joo; Z Lin; F H Arnold
Journal:  Nature       Date:  1999-06-17       Impact factor: 49.962

2.  Coumarin formation in novobiocin biosynthesis: beta-hydroxylation of the aminoacyl enzyme tyrosyl-S-NovH by a cytochrome P450 NovI.

Authors:  H Chen; C T Walsh
Journal:  Chem Biol       Date:  2001-04

3.  Gene engineering, purification, crystallization and preliminary X-ray diffraction of cytochrome P450 p-coumarate-3-hydroxylase (C3H), the Arabidopsis membrane protein.

Authors:  Young Ha Kim; TaeWoo Kwon; Hee Jung Yang; Wanyeon Kim; HyeSook Youn; Ji Young Lee; BuHyun Youn
Journal:  Protein Expr Purif       Date:  2011-04-29       Impact factor: 1.650

Review 4.  Metabolic engineering for the production of natural products.

Authors:  Lauren B Pickens; Yi Tang; Yit-Heng Chooi
Journal:  Annu Rev Chem Biomol Eng       Date:  2011       Impact factor: 11.059

5.  High-resolution crystal structure of cytochrome P450cam.

Authors:  T L Poulos; B C Finzel; A J Howard
Journal:  J Mol Biol       Date:  1987-06-05       Impact factor: 5.469

6.  The cytochrome p450 homepage.

Authors:  David R Nelson
Journal:  Hum Genomics       Date:  2009-10       Impact factor: 4.639

7.  Crystal structure of OxyC, a cytochrome P450 implicated in an oxidative C-C coupling reaction during vancomycin biosynthesis.

Authors:  Olena Pylypenko; Francesca Vitali; Katja Zerbe; John A Robinson; Ilme Schlichting
Journal:  J Biol Chem       Date:  2003-07-29       Impact factor: 5.157

8.  Crystal structures of metyrapone- and phenylimidazole-inhibited complexes of cytochrome P-450cam.

Authors:  T L Poulos; A J Howard
Journal:  Biochemistry       Date:  1987-12-15       Impact factor: 3.162

9.  Splicing factor SF3b as a target of the antitumor natural product pladienolide.

Authors:  Yoshihiko Kotake; Koji Sagane; Takashi Owa; Yuko Mimori-Kiyosue; Hajime Shimizu; Mai Uesugi; Yasushi Ishihama; Masao Iwata; Yoshiharu Mizui
Journal:  Nat Chem Biol       Date:  2007-07-22       Impact factor: 15.040

10.  Increase in pladienolide D production rate using a Streptomyces strain overexpressing a cytochrome P450 gene.

Authors:  Kazuhiro Machida; Yasuhide Aritoku; Takashi Nakashima; Akira Arisawa; Toshio Tsuchida
Journal:  J Biosci Bioeng       Date:  2008-06       Impact factor: 2.894

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  78 in total

Review 1.  Expanding P450 catalytic reaction space through evolution and engineering.

Authors:  John A McIntosh; Christopher C Farwell; Frances H Arnold
Journal:  Curr Opin Chem Biol       Date:  2014-03-20       Impact factor: 8.822

Review 2.  Use of chemical auxiliaries to control p450 enzymes for predictable oxidations at unactivated C-h bonds of substrates.

Authors:  Karine Auclair; Vanja Polic
Journal:  Adv Exp Med Biol       Date:  2015       Impact factor: 2.622

3.  In vitro reconstitution of the cyclosporine specific P450 hydroxylases using heterologous redox partner proteins.

Authors:  Yue Sun; Li Ma; Dongfei Han; Lei Du; Fengxia Qi; Wei Zhang; Jingran Sun; Shan Huang; Eung-Soo Kim; Shengying Li
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-25       Impact factor: 3.346

4.  Structural insights into the mechanism of the drastic changes in enzymatic activity of the cytochrome P450 vitamin D3 hydroxylase (CYP107BR1) caused by a mutation distant from the active site.

Authors:  Yoshiaki Yasutake; Tomoshi Kameda; Tomohiro Tamura
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-04-26       Impact factor: 1.056

5.  Molecular Basis of Iterative C─H Oxidation by TamI, a Multifunctional P450 monooxygenase from the Tirandamycin Biosynthetic Pathway.

Authors:  Sean A Newmister; Kinshuk Raj Srivastava; Rosa V Espinoza; Kersti Caddell Haatveit; Yogan Khatri; Rachel M Martini; Marc Garcia-Borràs; Larissa M Podust; K N Houk; David H Sherman
Journal:  ACS Catal       Date:  2020-11-04       Impact factor: 13.084

6.  Biochemical Establishment and Characterization of EncM's Flavin-N5-oxide Cofactor.

Authors:  Robin Teufel; Frederick Stull; Michael J Meehan; Quentin Michaudel; Pieter C Dorrestein; Bruce Palfey; Bradley S Moore
Journal:  J Am Chem Soc       Date:  2015-06-19       Impact factor: 15.419

7.  Substrate recognition by the multifunctional cytochrome P450 MycG in mycinamicin hydroxylation and epoxidation reactions.

Authors:  Shengying Li; Drew R Tietz; Florentine U Rutaganira; Petrea M Kells; Yojiro Anzai; Fumio Kato; Thomas C Pochapsky; David H Sherman; Larissa M Podust
Journal:  J Biol Chem       Date:  2012-09-05       Impact factor: 5.157

Review 8.  Controlling substrate specificity and product regio- and stereo-selectivities of P450 enzymes without mutagenesis.

Authors:  Vanja Polic; Karine Auclair
Journal:  Bioorg Med Chem       Date:  2014-06-25       Impact factor: 3.641

9.  Expanding the binding envelope of CYP51 inhibitors targeting Trypanosoma cruzi with 4-aminopyridyl-based sulfonamide derivatives.

Authors:  Debora F Vieira; Jun Yong Choi; William R Roush; Larissa M Podust
Journal:  Chembiochem       Date:  2014-04-25       Impact factor: 3.164

10.  Overcoming heterologous protein interdependency to optimize P450-mediated Taxol precursor synthesis in Escherichia coli.

Authors:  Bradley Walters Biggs; Chin Giaw Lim; Kristen Sagliani; Smriti Shankar; Gregory Stephanopoulos; Marjan De Mey; Parayil Kumaran Ajikumar
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

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