Literature DB >> 25745173

Nuclear pores. Architecture of the nuclear pore complex coat.

Tobias Stuwe1, Ana R Correia1, Daniel H Lin2, Marcin Paduch3, Vincent T Lu3, Anthony A Kossiakoff3, André Hoelz4.   

Abstract

The nuclear pore complex (NPC) constitutes the sole gateway for bidirectional nucleocytoplasmic transport. Despite half a century of structural characterization, the architecture of the NPC remains unknown. Here we present the crystal structure of a reconstituted ~400-kilodalton coat nucleoporin complex (CNC) from Saccharomyces cerevisiae at a 7.4 angstrom resolution. The crystal structure revealed a curved Y-shaped architecture and the molecular details of the coat nucleoporin interactions forming the central "triskelion" of the Y. A structural comparison of the yeast CNC with an electron microscopy reconstruction of its human counterpart suggested the evolutionary conservation of the elucidated architecture. Moreover, 32 copies of the CNC crystal structure docked readily into a cryoelectron tomographic reconstruction of the fully assembled human NPC, thereby accounting for ~16 megadalton of its mass.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 25745173      PMCID: PMC5180592          DOI: 10.1126/science.aaa4136

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  28 in total

1.  Template convolution to enhance or detect structural features in macromolecular electron-density maps.

Authors:  G J Kleywegt; T A Jones
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-03-01

2.  Structural and functional analysis of Nup120 suggests ring formation of the Nup84 complex.

Authors:  Hyuk-Soo Seo; Yingli Ma; Erik W Debler; Daniel Wacker; Stephan Kutik; Günter Blobel; André Hoelz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-11       Impact factor: 11.205

Review 3.  Characterization of the membrane-coating Nup84 complex: paradigm for the nuclear pore complex structure.

Authors:  Erik W Debler; Kuo-Chiang Hsia; Vivien Nagy; Hyuk-Soo Seo; André Hoelz
Journal:  Nucleus       Date:  2010-01-03       Impact factor: 4.197

4.  Linking crystallographic model and data quality.

Authors:  P Andrew Karplus; Kay Diederichs
Journal:  Science       Date:  2012-05-25       Impact factor: 47.728

5.  Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex.

Authors:  Yi Shi; Javier Fernandez-Martinez; Elina Tjioe; Riccardo Pellarin; Seung Joong Kim; Rosemary Williams; Dina Schneidman-Duhovny; Andrej Sali; Michael P Rout; Brian T Chait
Journal:  Mol Cell Proteomics       Date:  2014-08-26       Impact factor: 5.911

6.  Crystal structure of a tetradecameric assembly of the association domain of Ca2+/calmodulin-dependent kinase II.

Authors:  André Hoelz; Angus C Nairn; John Kuriyan
Journal:  Mol Cell       Date:  2003-05       Impact factor: 17.970

7.  Structural evidence for common ancestry of the nuclear pore complex and vesicle coats.

Authors:  Stephen G Brohawn; Nina C Leksa; Eric D Spear; Kanagalaghatta R Rajashankar; Thomas U Schwartz
Journal:  Science       Date:  2008-10-30       Impact factor: 47.728

8.  Allosteric control of ligand-binding affinity using engineered conformation-specific effector proteins.

Authors:  Shahir S Rizk; Marcin Paduch; John H Heithaus; Erica M Duguid; Andrew Sandstrom; Anthony A Kossiakoff
Journal:  Nat Struct Mol Biol       Date:  2011-03-06       Impact factor: 15.369

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  45 in total

1.  Linker Nups connect the nuclear pore complex inner ring with the outer ring and transport channel.

Authors:  Jessica Fischer; Roman Teimer; Stefan Amlacher; Ruth Kunze; Ed Hurt
Journal:  Nat Struct Mol Biol       Date:  2015-09-07       Impact factor: 15.369

2.  Architecture of the fungal nuclear pore inner ring complex.

Authors:  Tobias Stuwe; Christopher J Bley; Karsten Thierbach; Stefan Petrovic; Sandra Schilbach; Daniel J Mayo; Thibaud Perriches; Emily J Rundlet; Young E Jeon; Leslie N Collins; Ferdinand M Huber; Daniel H Lin; Marcin Paduch; Akiko Koide; Vincent Lu; Jessica Fischer; Ed Hurt; Shohei Koide; Anthony A Kossiakoff; André Hoelz
Journal:  Science       Date:  2015-08-27       Impact factor: 47.728

Review 3.  Toward the atomic structure of the nuclear pore complex: when top down meets bottom up.

Authors:  André Hoelz; Joseph S Glavy; Martin Beck
Journal:  Nat Struct Mol Biol       Date:  2016-06-06       Impact factor: 15.369

4.  Visualization of PML nuclear import complexes reveals FG-repeat nucleoporins at cargo retrieval sites.

Authors:  Anna Lång; Jens Eriksson; Kay Oliver Schink; Emma Lång; Pernille Blicher; Anna Połeć; Andreas Brech; Bjørn Dalhus; Stig Ove Bøe
Journal:  Nucleus       Date:  2017-04-12       Impact factor: 4.197

Review 5.  The nuclear pore complex: understanding its function through structural insight.

Authors:  Martin Beck; Ed Hurt
Journal:  Nat Rev Mol Cell Biol       Date:  2016-12-21       Impact factor: 94.444

Review 6.  The Structure of the Nuclear Pore Complex (An Update).

Authors:  Daniel H Lin; André Hoelz
Journal:  Annu Rev Biochem       Date:  2019-03-18       Impact factor: 23.643

7.  Systematic Protein-Protein Interaction Analysis Reveals Intersubcomplex Contacts in the Nuclear Pore Complex.

Authors:  Luise Apelt; Kevin E Knockenhauer; Nina C Leksa; Nouhad Benlasfer; Thomas U Schwartz; Ulrich Stelzl
Journal:  Mol Cell Proteomics       Date:  2016-05-18       Impact factor: 5.911

Review 8.  The nuclear pore complex core scaffold and permeability barrier: variations of a common theme.

Authors:  Ryo Hayama; Michael P Rout; Javier Fernandez-Martinez
Journal:  Curr Opin Cell Biol       Date:  2017-06-15       Impact factor: 8.382

9.  Cytoplasmic Parvovirus Capsids Recruit Importin Beta for Nuclear Delivery.

Authors:  Elina Mäntylä; Vesa Aho; Michael Kann; Maija Vihinen-Ranta
Journal:  J Virol       Date:  2020-01-31       Impact factor: 5.103

10.  Stoichiometry and compositional plasticity of the yeast nuclear pore complex revealed by quantitative fluorescence microscopy.

Authors:  Sasikumar Rajoo; Pascal Vallotton; Evgeny Onischenko; Karsten Weis
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-09       Impact factor: 11.205

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