Literature DB >> 19706512

Structural and functional analysis of Nup120 suggests ring formation of the Nup84 complex.

Hyuk-Soo Seo1, Yingli Ma, Erik W Debler, Daniel Wacker, Stephan Kutik, Günter Blobel, André Hoelz.   

Abstract

The Nup84 complex constitutes a key building block in the nuclear pore complex (NPC). Here we present the crystal structure of one of its 7 components, Nup120, which reveals a beta propeller and an alpha-helical domain representing a novel fold. We discovered a previously unidentified interaction of Nup120 with Nup133 and confirmed the physiological relevance in vivo. As mapping of the individual components in the Nup84 complex places Nup120 and Nup133 at opposite ends of the heptamer, our findings indicate a head-to-tail arrangement of elongated Nup84 complexes into a ring structure, consistent with a fence-like coat for the nuclear pore membrane. The attachment site for Nup133 lies at the very end of an extended unstructured region, which allows for flexibility in the diameter of the Nup84 complex ring. These results illuminate important roles of terminal unstructured segments in nucleoporins for the architecture, function, and assembly of the NPC.

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Year:  2009        PMID: 19706512      PMCID: PMC2732846          DOI: 10.1073/pnas.0907453106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  48 in total

Review 1.  Protein folds propelled by diversity.

Authors:  M Paoli
Journal:  Prog Biophys Mol Biol       Date:  2001       Impact factor: 3.667

2.  Architecture and design of the nuclear pore complex.

Authors:  J E Hinshaw; B O Carragher; R A Milligan
Journal:  Cell       Date:  1992-06-26       Impact factor: 41.582

3.  Structural plasticity of the nuclear pore complex.

Authors:  C W Akey
Journal:  J Mol Biol       Date:  1995-04-28       Impact factor: 5.469

4.  Proteomic analysis of nucleoporin interacting proteins.

Authors:  N P Allen; L Huang; A Burlingame; M Rexach
Journal:  J Biol Chem       Date:  2001-05-31       Impact factor: 5.157

5.  Structure and assembly of the Nup84p complex.

Authors:  S Siniossoglou; M Lutzmann; H Santos-Rosa; K Leonard; S Mueller; U Aebi; E Hurt
Journal:  J Cell Biol       Date:  2000-04-03       Impact factor: 10.539

6.  The yeast nuclear pore complex: composition, architecture, and transport mechanism.

Authors:  M P Rout; J D Aitchison; A Suprapto; K Hjertaas; Y Zhao; B T Chait
Journal:  J Cell Biol       Date:  2000-02-21       Impact factor: 10.539

7.  Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export.

Authors:  S Vasu; S Shah; A Orjalo; M Park; W H Fischer; D J Forbes
Journal:  J Cell Biol       Date:  2001-10-29       Impact factor: 10.539

8.  An evolutionarily conserved NPC subcomplex, which redistributes in part to kinetochores in mammalian cells.

Authors:  N Belgareh; G Rabut; S W Baï; M van Overbeek; J Beaudouin; N Daigle; O V Zatsepina; F Pasteau; V Labas; M Fromont-Racine; J Ellenberg; V Doye
Journal:  J Cell Biol       Date:  2001-09-17       Impact factor: 10.539

9.  Three-dimensional structure and flexibility of a membrane-coating module of the nuclear pore complex.

Authors:  Martin Kampmann; Günter Blobel
Journal:  Nat Struct Mol Biol       Date:  2009-06-07       Impact factor: 15.369

10.  Structure of quinoprotein methylamine dehydrogenase at 2.25 A resolution.

Authors:  F M Vellieux; F Huitema; H Groendijk; K H Kalk; J F Jzn; J A Jongejan; J A Duine; K Petratos; J Drenth; W G Hol
Journal:  EMBO J       Date:  1989-08       Impact factor: 11.598

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  40 in total

Review 1.  The nuclear pore complex and nuclear transport.

Authors:  Susan R Wente; Michael P Rout
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-07-14       Impact factor: 10.005

2.  Structure and nucleic acid binding activity of the nucleoporin Nup157.

Authors:  Hyuk-Soo Seo; Bartlomiej J Blus; Nina Z Jankovic; Günter Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-23       Impact factor: 11.205

3.  Structural evolution of the membrane-coating module of the nuclear pore complex.

Authors:  Xiaoping Liu; Jana M Mitchell; Richard W Wozniak; Günter Blobel; Jie Fan
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-26       Impact factor: 11.205

4.  Structure of a trimeric nucleoporin complex reveals alternate oligomerization states.

Authors:  Vivien Nagy; Kuo-Chiang Hsia; Erik W Debler; Martin Kampmann; Andrew M Davenport; Günter Blobel; André Hoelz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-01       Impact factor: 11.205

Review 5.  Toward the atomic structure of the nuclear pore complex: when top down meets bottom up.

Authors:  André Hoelz; Joseph S Glavy; Martin Beck
Journal:  Nat Struct Mol Biol       Date:  2016-06-06       Impact factor: 15.369

Review 6.  Characterization of the membrane-coating Nup84 complex: paradigm for the nuclear pore complex structure.

Authors:  Erik W Debler; Kuo-Chiang Hsia; Vivien Nagy; Hyuk-Soo Seo; André Hoelz
Journal:  Nucleus       Date:  2010-01-03       Impact factor: 4.197

Review 7.  The nuclear pore complex: understanding its function through structural insight.

Authors:  Martin Beck; Ed Hurt
Journal:  Nat Rev Mol Cell Biol       Date:  2016-12-21       Impact factor: 94.444

Review 8.  The Structure of the Nuclear Pore Complex (An Update).

Authors:  Daniel H Lin; André Hoelz
Journal:  Annu Rev Biochem       Date:  2019-03-18       Impact factor: 23.643

9.  Molecular basis for Nup37 and ELY5/ELYS recruitment to the nuclear pore complex.

Authors:  Silvija Bilokapic; Thomas U Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-05       Impact factor: 11.205

10.  The compartmentalized bacteria of the planctomycetes-verrucomicrobia-chlamydiae superphylum have membrane coat-like proteins.

Authors:  Rachel Santarella-Mellwig; Josef Franke; Andreas Jaedicke; Mátyás Gorjánácz; Ulrike Bauer; Aidan Budd; Iain W Mattaj; Damien P Devos
Journal:  PLoS Biol       Date:  2010-01-19       Impact factor: 8.029

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