Literature DB >> 27273515

Toward the atomic structure of the nuclear pore complex: when top down meets bottom up.

André Hoelz1, Joseph S Glavy2, Martin Beck3.   

Abstract

Elucidating the structure of the nuclear pore complex (NPC) is a prerequisite for understanding the molecular mechanism of nucleocytoplasmic transport. However, owing to its sheer size and flexibility, the NPC is unapproachable by classical structure determination techniques and requires a joint effort of complementary methods. Whereas bottom-up approaches rely on biochemical interaction studies and crystal-structure determination of NPC components, top-down approaches attempt to determine the structure of the intact NPC in situ. Recently, both approaches have converged, thereby bridging the resolution gap from the higher-order scaffold structure to near-atomic resolution and opening the door for structure-guided experimental interrogations of NPC function.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27273515      PMCID: PMC5156573          DOI: 10.1038/nsmb.3244

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  42 in total

1.  The entire Nup107-160 complex, including three new members, is targeted as one entity to kinetochores in mitosis.

Authors:  Isabelle Loïodice; Annabelle Alves; Gwénaël Rabut; Megan Van Overbeek; Jan Ellenberg; Jean-Baptiste Sibarita; Valérie Doye
Journal:  Mol Biol Cell       Date:  2004-05-14       Impact factor: 4.138

2.  Precise mapping of subunits in multiprotein complexes by a versatile electron microscopy label.

Authors:  Dirk Flemming; Karsten Thierbach; Philipp Stelter; Bettina Böttcher; Ed Hurt
Journal:  Nat Struct Mol Biol       Date:  2010-05-30       Impact factor: 15.369

3.  Linker Nups connect the nuclear pore complex inner ring with the outer ring and transport channel.

Authors:  Jessica Fischer; Roman Teimer; Stefan Amlacher; Ruth Kunze; Ed Hurt
Journal:  Nat Struct Mol Biol       Date:  2015-09-07       Impact factor: 15.369

4.  Structural and functional analysis of Nup120 suggests ring formation of the Nup84 complex.

Authors:  Hyuk-Soo Seo; Yingli Ma; Erik W Debler; Daniel Wacker; Stephan Kutik; Günter Blobel; André Hoelz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-11       Impact factor: 11.205

Review 5.  Towards understanding nuclear pore complex architecture and dynamics in the age of integrative structural analysis.

Authors:  Ed Hurt; Martin Beck
Journal:  Curr Opin Cell Biol       Date:  2015-05-15       Impact factor: 8.382

6.  Structural plasticity of the nuclear pore complex.

Authors:  C W Akey
Journal:  J Mol Biol       Date:  1995-04-28       Impact factor: 5.469

7.  Structural evidence for common ancestry of the nuclear pore complex and vesicle coats.

Authors:  Stephen G Brohawn; Nina C Leksa; Eric D Spear; Kanagalaghatta R Rajashankar; Thomas U Schwartz
Journal:  Science       Date:  2008-10-30       Impact factor: 47.728

8.  Atomic structure of the Y complex of the nuclear pore.

Authors:  Kotaro Kelley; Kevin E Knockenhauer; Greg Kabachinski; Thomas U Schwartz
Journal:  Nat Struct Mol Biol       Date:  2015-03-30       Impact factor: 15.369

9.  Cell type-specific nuclear pores: a case in point for context-dependent stoichiometry of molecular machines.

Authors:  Alessandro Ori; Niccolò Banterle; Murat Iskar; Amparo Andrés-Pons; Claudia Escher; Huy Khanh Bui; Lenore Sparks; Victor Solis-Mezarino; Oliver Rinner; Peer Bork; Edward A Lemke; Martin Beck
Journal:  Mol Syst Biol       Date:  2013       Impact factor: 11.429

10.  Proteomic analysis of the mammalian nuclear pore complex.

Authors:  Janet M Cronshaw; Andrew N Krutchinsky; Wenzhu Zhang; Brian T Chait; Michael J Matunis
Journal:  J Cell Biol       Date:  2002-08-26       Impact factor: 10.539

View more
  29 in total

Review 1.  Nuclear pore complexes and regulation of gene expression.

Authors:  Marcela Raices; Maximiliano A D'Angelo
Journal:  Curr Opin Cell Biol       Date:  2017-01-11       Impact factor: 8.382

2.  Nup133 Is Required for Proper Nuclear Pore Basket Assembly and Dynamics in Embryonic Stem Cells.

Authors:  Benoit Souquet; Ellen Freed; Alessandro Berto; Vedrana Andric; Nicolas Audugé; Bernardo Reina-San-Martin; Elizabeth Lacy; Valérie Doye
Journal:  Cell Rep       Date:  2018-05-22       Impact factor: 9.423

3.  Protein Interaction Analysis Provides a Map of the Spatial and Temporal Organization of the Ciliary Gating Zone.

Authors:  Daisuke Takao; Liang Wang; Allison Boss; Kristen J Verhey
Journal:  Curr Biol       Date:  2017-07-20       Impact factor: 10.834

Review 4.  The nuclear pore complex core scaffold and permeability barrier: variations of a common theme.

Authors:  Ryo Hayama; Michael P Rout; Javier Fernandez-Martinez
Journal:  Curr Opin Cell Biol       Date:  2017-06-15       Impact factor: 8.382

5.  Stoichiometry and compositional plasticity of the yeast nuclear pore complex revealed by quantitative fluorescence microscopy.

Authors:  Sasikumar Rajoo; Pascal Vallotton; Evgeny Onischenko; Karsten Weis
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-09       Impact factor: 11.205

Review 6.  The Quest for the Blueprint of the Nuclear Pore Complex.

Authors:  Joseph S Glavy
Journal:  Protein J       Date:  2019-08       Impact factor: 2.371

7.  Probing High Permeability of Nuclear Pore Complexes by Scanning Electrochemical Microscopy: Ca2+ Effects on Transport Barriers.

Authors:  Pavithra Pathirathna; Ryan J Balla; Dylan T Jantz; Niraja Kurapati; Erin R Gramm; Kevin C Leonard; Shigeru Amemiya
Journal:  Anal Chem       Date:  2019-04-03       Impact factor: 6.986

8.  ROCK-dependent phosphorylation of NUP62 regulates p63 nuclear transport and squamous cell carcinoma proliferation.

Authors:  Masaharu Hazawa; De-Chen Lin; Akiko Kobayashi; Yan-Yi Jiang; Liang Xu; Firli Rahmah Primula Dewi; Mahmoud Shaaban Mohamed; Mitsutoshi Nakada; Makiko Meguro-Horike; Shin-Ichi Horike; H Phillip Koeffler; Richard W Wong
Journal:  EMBO Rep       Date:  2017-12-07       Impact factor: 8.807

9.  In-cell architecture of the nuclear pore and snapshots of its turnover.

Authors:  Matteo Allegretti; Christian E Zimmerli; Vasileios Rantos; Florian Wilfling; Paolo Ronchi; Herman K H Fung; Chia-Wei Lee; Wim Hagen; Beata Turoňová; Kai Karius; Mandy Börmel; Xiaojie Zhang; Christoph W Müller; Yannick Schwab; Julia Mahamid; Boris Pfander; Jan Kosinski; Martin Beck
Journal:  Nature       Date:  2020-09-02       Impact factor: 49.962

Review 10.  Lost in Transportation: Nucleocytoplasmic Transport Defects in ALS and Other Neurodegenerative Diseases.

Authors:  Hong Joo Kim; J Paul Taylor
Journal:  Neuron       Date:  2017-10-11       Impact factor: 17.173

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.