Literature DB >> 25726700

Dynamics of equilibrium folding and unfolding transitions of titin immunoglobulin domain under constant forces.

Hu Chen1,2, Guohua Yuan1,2, Ricksen S Winardhi2, Mingxi Yao2, Ionel Popa3, Julio M Fernandez3, Jie Yan2,4,5.   

Abstract

The mechanical stability of force-bearing proteins is crucial for their functions. However, slow transition rates of complex protein domains have made it challenging to investigate their equilibrium force-dependent structural transitions. Using ultra stable magnetic tweezers, we report the first equilibrium single-molecule force manipulation study of the classic titin I27 immunoglobulin domain. We found that individual I27 in a tandem repeat unfold/fold independently. We obtained the force-dependent free energy difference between unfolded and folded I27 and determined the critical force (∼5.4 pN) at which unfolding and folding have equal probability. We also determined the force-dependent free energy landscape of unfolding/folding transitions based on measurement of the free energy cost of unfolding. In addition to providing insights into the force-dependent structural transitions of titin I27, our results suggest that the conformations of titin immunoglobulin domains can be significantly altered during low force, long duration muscle stretching.

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Year:  2015        PMID: 25726700      PMCID: PMC4446711          DOI: 10.1021/ja5119368

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  42 in total

1.  SCOP: a structural classification of proteins database.

Authors:  L Lo Conte; B Ailey; T J Hubbard; S E Brenner; A G Murzin; C Chothia
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Folding studies of immunoglobulin-like beta-sandwich proteins suggest that they share a common folding pathway.

Authors:  J Clarke; E Cota; S B Fowler; S J Hamill
Journal:  Structure       Date:  1999-09-15       Impact factor: 5.006

3.  Magnetic torque tweezers: measuring torsional stiffness in DNA and RecA-DNA filaments.

Authors:  Jan Lipfert; Jacob W J Kerssemakers; Tessa Jager; Nynke H Dekker
Journal:  Nat Methods       Date:  2010-10-17       Impact factor: 28.547

4.  Magnetic tweezers measurement of the bond lifetime-force behavior of the IgG-protein A specific molecular interaction.

Authors:  Hao Shang; Gil U Lee
Journal:  J Am Chem Soc       Date:  2007-04-28       Impact factor: 15.419

5.  Differential mechanical stability of filamin A rod segments.

Authors:  Hu Chen; Xiaoying Zhu; Peiwen Cong; Michael P Sheetz; Fumihiko Nakamura; Jie Yan
Journal:  Biophys J       Date:  2011-09-07       Impact factor: 4.033

6.  Immunoglobulin-like modules from titin I-band: extensible components of muscle elasticity.

Authors:  S Improta; A S Politou; A Pastore
Journal:  Structure       Date:  1996-03-15       Impact factor: 5.006

7.  S-glutathionylation of cryptic cysteines enhances titin elasticity by blocking protein folding.

Authors:  Jorge Alegre-Cebollada; Pallav Kosuri; David Giganti; Edward Eckels; Jaime Andrés Rivas-Pardo; Nazha Hamdani; Chad M Warren; R John Solaro; Wolfgang A Linke; Julio M Fernández
Journal:  Cell       Date:  2014-03-13       Impact factor: 41.582

8.  Force-dependent conformational switch of α-catenin controls vinculin binding.

Authors:  Mingxi Yao; Wu Qiu; Ruchuan Liu; Artem K Efremov; Peiwen Cong; Rima Seddiki; Manon Payre; Chwee Teck Lim; Benoit Ladoux; René-Marc Mège; Jie Yan
Journal:  Nat Commun       Date:  2014-07-31       Impact factor: 14.919

Review 9.  Stretchy proteins on stretchy substrates: the important elements of integrin-mediated rigidity sensing.

Authors:  Simon W Moore; Pere Roca-Cusachs; Michael P Sheetz
Journal:  Dev Cell       Date:  2010-08-17       Impact factor: 12.270

10.  Mechanical perturbation of filamin A immunoglobulin repeats 20-21 reveals potential non-equilibrium mechanochemical partner binding function.

Authors:  Hu Chen; Saranya Chandrasekar; Michael P Sheetz; Thomas P Stossel; Fumihiko Nakamura; Jie Yan
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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  33 in total

1.  Structure-Based Derivation of Protein Folding Intermediates and Energies from Optical Tweezers.

Authors:  Aleksander A Rebane; Lu Ma; Yongli Zhang
Journal:  Biophys J       Date:  2016-01-19       Impact factor: 4.033

Review 2.  Passive force enhancement in striated muscle.

Authors:  Walter Herzog
Journal:  J Appl Physiol (1985)       Date:  2019-05-09

3.  Competing Pathways and Multiple Folding Nuclei in a Large Multidomain Protein, Luciferase.

Authors:  Zackary N Scholl; Weitao Yang; Piotr E Marszalek
Journal:  Biophys J       Date:  2017-05-09       Impact factor: 4.033

4.  Probing Small Molecule Binding to Unfolded Polyprotein Based on its Elasticity and Refolding.

Authors:  Ricksen S Winardhi; Qingnan Tang; Jin Chen; Mingxi Yao; Jie Yan
Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

5.  A HaloTag Anchored Ruler for Week-Long Studies of Protein Dynamics.

Authors:  Ionel Popa; Jaime Andrés Rivas-Pardo; Edward C Eckels; Daniel J Echelman; Carmen L Badilla; Jessica Valle-Orero; Julio M Fernández
Journal:  J Am Chem Soc       Date:  2016-08-09       Impact factor: 15.419

6.  Single-molecule Manipulation of G-quadruplexes by Magnetic Tweezers.

Authors:  Huijuan You; Shimin Le; Hu Chen; Linyan Qin; Jie Yan
Journal:  J Vis Exp       Date:  2017-09-19       Impact factor: 1.355

Review 7.  Molecular Tension Probes for Imaging Forces at the Cell Surface.

Authors:  Yang Liu; Kornelia Galior; Victor Pui-Yan Ma; Khalid Salaita
Journal:  Acc Chem Res       Date:  2017-11-21       Impact factor: 22.384

Review 8.  The Work of Titin Protein Folding as a Major Driver in Muscle Contraction.

Authors:  Edward C Eckels; Rafael Tapia-Rojo; Jamie Andrés Rivas-Pardo; Julio M Fernández
Journal:  Annu Rev Physiol       Date:  2018-02-10       Impact factor: 19.318

9.  Monitoring Unfolding of Titin I27 Single and Bi Domain with High-Pressure NMR Spectroscopy.

Authors:  Isaline Herrada; Philippe Barthe; Marisa Vanheusden; Karine DeGuillen; Léa Mammri; Stéphane Delbecq; Felix Rico; Christian Roumestand
Journal:  Biophys J       Date:  2018-07-17       Impact factor: 4.033

10.  Work Done by Titin Protein Folding Assists Muscle Contraction.

Authors:  Jaime Andrés Rivas-Pardo; Edward C Eckels; Ionel Popa; Pallav Kosuri; Wolfgang A Linke; Julio M Fernández
Journal:  Cell Rep       Date:  2016-02-04       Impact factor: 9.423

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